Linked-read sequencing for genome-scale phasing, de novo assembly and single-cell transcriptome analysis


The research group in Molecular Medicine and the SNP&SEQ Technology Platform welcome you to a symposium covering applications of the novel Chromium system from 10X Genomics.

Program

13.00 Registration

13.15 Welcome Ann-Christine Syvänen (Department of Medical Sciences, Uppsala University)

13.25 Annika Branting (10X Genomics) Introduction to the Chromium system

14.05 Vagheesh Narasimhan (Wellcome Trust Sanger Institute) An adult human knockout of PRDM9: using phased WGS to understand meiosis

14.45 Coffee

15.10 Mårten Lindqvist (Department of Medical Sciences, Uppsala University). Phasing and structural variant detection in acute lymphoblastic leukemia

15.30 Sangeet Lamichhaney (Department of Medical Biochemistry and Microbiology, Uppsala University) The genetic basis for ecological adaptation and evolution

16.00 Sten Linnarsson (Department of Medical Biochemistry and Biophysics, Karolinska Institute) Molecular anatomy of the brain, by large-scale single-cell RNA-seq

Practical information

Venue: Lecture hall B10:1, Biomedical Center (BMC), Husargatan 3, Uppsala (Entrance A11)

Registration: Please click here for registration. The last day to register is May 18. The event is free of charge.

Program in PDF

For information about the event, please contact eva.berglund@medsci.uu.se or tom.martin@medsci.uu.se