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SUMMARY:New Imaging and Fluctuation Methods: Super-Resolution\, Light-Sheet\, STED-FCS and FRET-FCS
DESCRIPTION:Web-based PhD-level course\, 3 hp credits\, by the ALM facility at Scilifelab. \n\n\n\nFlyer_220119\n\n\n\nLight-Sheet Imaging\n\n\n\nLong time-lapse imaging of live modelorganisms with low phototoxicityCombined light-sheet andsuper-resolution\n\n\n\nSuper-Resolution Imaging in Living Cells – MoNaLISA\n\n\n\nSmart probes50 nm resolution at 1-2 Hz100 x 100 um field of view time lapse imaging\n\n\n\n \n\n\n\nSTED-FCS\n\n\n\nFluctuation spectroscopy with 30 nm resolutionSub-diffraction dynamics in living cells\n\n\n\n \n\n\n\nFRET-FCS\n\n\n\nEasy detection of protein-protein interactions in living cellsHighly sensitive detection of rare oligomers in living cells\n\n\n\nLecturers\n\n\n\nAndreas BodénErdinc SezginIlaria TestaStefan Wennmalm\, stewen@kth.se \n\n\n\nRegistration\n\n\n\nPlease register by sending an e-mail with your contact details to: stewen@kth.se.Registration deadline: May 20\, 2022
URL:https://www.scilifelab.se/event/new-imaging-and-fluctuation-methods-super-resolution-light-sheet-sted-fcs-and-fret-fcs/
LOCATION:Online event via Zoom
CATEGORIES:Course
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DTSTART;TZID=Europe/Stockholm:20220613T080000
DTEND;TZID=Europe/Stockholm:20220617T170000
DTSTAMP:20260409T072713
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SUMMARY:RaukR\, Advanced R for Bioinformatics - Online workshop
DESCRIPTION:International workshop. The workshop is open for researchers at university or in industry such as PhD students\, postdocs\, group leaders\, core facility staff and analysts. \n\n\n\nJoin us online this June to improve your R skills and have a nice time!In Life Science and Bioinformatics\, R is increasingly being used to transform and analyse data\, perform statistical analysis and produce publication-ready visualisations. This workshop will focus on advanced R functionality\, to increase the participants skillset and understanding of what is possible to do today. \n\n\n\nWhile we still cannot gather in Visby due variability of pandemic restrictions internationally\, we will have the workshop online! We hope that\, like last year\, we will learn a lot and have fun coding together! See you there! \n\n\n\nThe workshop is organised by NBIS.  \n\n\n\nResponsible teachers: Marcin Kierczak\, Sebastian DiLorenzo\, Roy FrancisContact: RaukR@NBIS.se \n\n\n\nYou are very welcome to apply or see the website for more information. Please\, help us spread the word to interested participants! \n\n\n\n\n\n\n\n\nAPPLICATION\n\n\n\nWEBSITE\n\n\n\n\n\n\n\n\nImportant dates\n\n\n\nApplication deadline: Fri\, 13.05.2022\, 24:00GMT \n\n\n\nNotification of acceptance/decline: Fri\, 20.05.2022 \n\n\n\nWorkshop fee\n\n\n\nAcademic: no fee this year. However\, if you register and will be admitted but you will not attend the event without a valid reason\, you will be charged a no-show fee (4000 SEK). \n\n\n\nParticipants from outside of academia should contact us for a fee quote. \n\n\n\nThe fee does not include travel costs. \n\n\n\nGuest speakers\n\n\n\nJenny Bryan (software engineer at RStudio\, Data science professor at UBC) Yihui Xie (software engineer at RStudio) Christophe Dervieux (software engineer at RStudio)  \n\n\n\nContent\n\n\n\nreproducible research in R (rmarkdown\, knitr)\,collaborative work using git and GitHub\, CD/CI\,R code style guidelines\,code debugging\, optimization and profiling\,parallelization and vectorization in R\,writing own functions – best practices\,understanding and using the system of R classes: S3\, S4\, R6 and RC\,anatomy of an R package: writing your own package from scratch\,code debugging\, profiling and optimization\,tidy data flow with tidyverse\,using the language of graphics\, ggplot2\,developing simple web applications using shiny\,R and Python integration using reticulate\n\n\n\nEntry requirements\n\n\n\nThe workshop is aimed at both Ph.D. students and researchers within Life Sciences who are already using R for basic bioinformatics analyses and who would like to start using R at a more advanced level. In order for you and other participants to benefit the most\, you should consider yourself eligible if you are comfortable with reading and transforming data\, installing and using third-party packages and plotting using standard R graphics. \n\n\n\nWe offer places for participants from all over the world\, but there is a number of places reserved for participants from Sweden. \n\n\n\nSelection criteria\n\n\n\nThis year\, we can accommodate ~30 participants. Selection criteria include correct entry requirements\, motivation to attend the workshop as well as gender and geographical balance.
URL:https://www.scilifelab.se/event/raukr-advanced-r-for-bioinformatics-workshop/
LOCATION:Online event via Zoom
CATEGORIES:Course
ORGANIZER;CN="NBIS - National Bioinformatics Infrastructure Sweden":MAILTO:education@nbis.se
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DTSTART;TZID=Europe/Stockholm:20220627T080000
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SUMMARY:Summer School in Transcriptomics during Development and Cancer
DESCRIPTION:Come to this beautiful Swedish inland scenario to learn the most advanced technologies to study transcriptional regulation.Sandvik Gård\, a beautiful conference centre and spa\, majestically situated on a lake in the forest of Östergötland – less than 2 hours south-west of Stockholm\, Sweden \n\n\n\nCourse overviewDates: 27 – 30 June 2022 \n\n\n\nThis course is designed for PhD students and Postdocs who work in the field studying the Transcriptional Control of the Genome during Embryonic Development\, Cell Differentiation\, and Disease\, or for those who would like to approach it. \n\n\n\nHere\, we will strive to provide each participating student with a robust theoretical foundation of the most important questions in the field\, and the spectrum of technologies that are currently under development to respond them. For example\, one of the primary focuses will be to discuss how to combine “wet” and “dry” technologies to address computationally demanding\, important biological questions. \n\n\n\nA key feature of this course will be the relatively low ratio between participants and teachers/speakers. This will allow each participant to come in close contact with successful scientists and learn how they developed key technologies to respond to pressing questions in their field. \n\n\n\nThe course will include talks\, group discussions and activities\, but no practical work. \n\n\n\nThe school will also include a short course on scientific writing for developmental and cancer biologists. \n\n\n\nCourse FlyerDownload
URL:https://www.scilifelab.se/event/summer-school-in-transcriptomics-during-development-and-cancer/
LOCATION:Sandvik Gård\, Sandvik Gård 1\, Åby\, Sweden
CATEGORIES:Course
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