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BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220524T100000
DTEND;TZID=Europe/Stockholm:20220524T110000
DTSTAMP:20260407T144710
CREATED:20220504T155131Z
LAST-MODIFIED:20220504T155220Z
UID:10000601-1653386400-1653390000@www.scilifelab.se
SUMMARY:Solid tumours as dynamic cellular ecosystems
DESCRIPTION:Dr. Alex Swarbrick\, Garvan Institute for Medical Research\, Australia \n\n\n\nLocation: Air/FireDate: 10.00 24th of May \n\n\n\nAbstract: A well-established principle in developmental biology is that cellular context governs cell fate\, differentiation\, proliferation and survival. There is emerging evidence that solid tumours are also complex cellular systems\, or ecosystems\, in which interactions between neoplastic\, stromal and immune cells govern the natural history of disease and response to treatment. In this seminar Dr Swarbrick will discuss his latest research applying cellular genomics to understanding breast cancer ecosystems\, with the aim of making new discoveries relevant to disease stratification and treatment.
URL:https://www.scilifelab.se/event/solid-tumours-as-dynamic-cellular-ecosystems/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Joakim Lundeberg":MAILTO:joakim.lundeberg@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220524T110000
DTEND;TZID=Europe/Stockholm:20220524T115000
DTSTAMP:20260407T144710
CREATED:20220520T144620Z
LAST-MODIFIED:20220520T145411Z
UID:10000613-1653390000-1653393000@www.scilifelab.se
SUMMARY:SciLifeLab Uppsala PhD&Postdoc seminar
DESCRIPTION:Welcome to SciLifeLab Uppsala PhD&Postdoc seminars! \nWe are very happy to host exciting talks by PhD students and Postdocs from a great variety of fields within SciLifeLab. \n\n \n\n\n\nSpeaker 1: Hongxing Zhao\, Researcher at Ulf Landegren Lab (Molecular Tools)\, Dept. of Immunology\, Genetics and Pathology\n\n\n\nTitle: Detection of SARS-CoV-2 antibodies from dried blood spots of vaccine individuals by proximity extension assay Summary: We have developed a solution-phase assay for sensitive detection of SARS-CoV-2 antibodies in serum or dried blood spots (DBS) from infected or vaccinated individuals. Detection probes were prepared by conjugating the recombinant S1-RBD or nucleocapsid (NC) to either of a pair of oligonucleotides. Upon incubation with COVID-19 patient serum or DBS from vaccinated individuals\, the multivalency of the antibodies brings pairs of oligonucleotides that have been conjugated to the viral proteins in proximity. The oligonucleotides can then undergo enzymatic DNA extension via a proximity extension assay (PEA)\, and the resulting amplicons are sensitively detected by real-time PCR or end-point read out using ELISA mechine. This antibody PEA (AbPEA) test uses only 1 µl neat or diluted serum or one ø1.2 mm disc cut from a DBS. All 100 investigated sera and 21 DBS collected prior to the COVID-19 outbreak were negative\, demonstrating a 100% specificity. The sensitivity of the assay for infected patient after 10 days symptom reached 99.8% [95% confidence interval: 0.9935-1]. Anti-S1 antibodies could be detected directly in punched-out discs from self-sampled DBS 11 days after vaccination\, and it reached a maximum at 3 weeks after a first inoculation. Examination of a serially collected DBS from 14 individuals all showed similar trends of antibody responses after both a first and second vaccination\, although antibody levels varied between individuals. \n\n\n\nSpeaker 2: Manon Dubol\, PhD. Postdoctoral Researcher at Erika Comasco Neuropsychopharmacology Group\, Dept. of Women and Children’s Health\n\n\n\n\n\n\n\nTitle: Grey matter morphometry and MRI data-driven classification of premenstrual dysphoric disorder (PMDD) Summary: Premenstrual dysphoric disorder (PMDD) is recognized in the DSM-5 as a hormone-related depressive disorder\, specific to women’s mental health 1. Women who suffer from PMDD experience affective\, cognitive\, and physical symptoms that peak during the late luteal phase of the menstrual cycle\, and remit shortly in the beginning of the next cycle 2. The key affective symptoms of PMDD point to anatomical and functional brain impairment\, suggesting an impaired top-down inhibitory process involving limbic brain structures 3. However\, very little is known about brain morphological alterations in PMDD. The present study aimed at investigating the grey matter structures that distinguish women with PMDD from healthy controls\, by use of multiscale structural MRI analyses. Differences in grey matter structure between the groups were investigated by use of Voxel- and Surface Based Morphometry. Furthermore\, machine learning and multivariate pattern analysis was performed using a leave-one-fold-out cross-validation procedure\, to test whether MRI measures (volume\, thickness\, gyrification\, sulcal depth and cortical complexity) could distinguish women with PMDD from healthy controls. The findings point to PMDD-specific grey matter structure in regions of corticolimbic networks\, in line with the hypothesis of an impaired top-down inhibitory circuit involving limbic structures in PMDD. Furthermore\, the results include widespread cortical regions and cerebellar areas\, suggesting the involvement of distinct networks in PMDD pathophysiology. These effects prominently involved volumetric and cortical thickness measures\, as further highlighted by multivariate pattern classification analyses. Such differences in brain structure may help explaining the variations in brain function previously reported in women with PMDD during the symptomatic phase.
URL:https://www.scilifelab.se/event/scilifelab-uppsala-phdpostdoc-seminar/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/05/SciLifeLab-PhDPostdoc-conuncil-poster_landscape_May_24.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220524T120000
DTEND;TZID=Europe/Stockholm:20220524T130000
DTSTAMP:20260407T144710
CREATED:20220519T081250Z
LAST-MODIFIED:20220519T081441Z
UID:10000611-1653393600-1653397200@www.scilifelab.se
SUMMARY:NGS at NGI
DESCRIPTION:In the frame of the “SciLifeLab Site Umeå / KBC Infrastructure Seminar Series”\, the seminars will be organised every second Tuesday during spring 2022 in turn with IceLab Lunch Pitches. The seminars will be held in a hybrid format IRL in Glasburen\, KBC\, and online via Zoom. Take the chance to get information on facilities\, possibilities and services that infrastructure\, both SciLifeLab-associated and local\, can offer! Learn more about the seminar series and Schedule for Spring 2022 here. \n\n\n\nOn May 24th\, 12:00-13:00\, you are welcome to participate in the seminar \n\n\n\nNGS at NGI \n\n\n\nby Kristina Benevides\, Project coordinator\, National Genomics Infrastructure (NGI)\, SciLifeLab\, and research engineer in bioinformatics and sequencing\, UPSC Bioinformatics Facility\, Department of Plant Physiology\, Umeå University \n\n\n\nSeminar description\n\n\n\nGot samples? We’ve got the sequencing! NGI(https://ngisweden.scilifelab.se/) is one of the largest platforms at SciLifeLab and provides both established and cutting-edge genomics technologies to diverse user groups across Sweden and internationally. There’s a wide range of applications as NGI is equipped with both short- and long read technologies\, as well as SNP genotyping- and DNA methylation arrays. The platform assists users in project design\, data generation\, analysis and management of data in order to support genomics research in all subject areas. \n\n\n\nPrepare for your next (generation) sequencing experiment as we’ll get into the nitty-gritty of some different methods\, sample types and requirements. \n\n\n\nThere will be a fun online science quiz at the end – participate to win some swag! \n\n\n\nRegistration\n\n\n\nSign up (latest by May 23rd\, 10 a.m.) for on-site attendance to reserve your free lunch sandwich: \n\n\n\nsign up\n\n\n\nor follow online via Zoom: https://umu.zoom.us/j/63138997026 (registration is not required). \n\n\n\nOrganisers\n\n\n\nSciLifeLab Site Umeå and Chemical Biological Centre (KBC)
URL:https://www.scilifelab.se/event/ngs-at-ngi/
LOCATION:Glasburen Seminar Room\, Chemical Biological Centre (KBC) Building\, Umeå University\, Umeå\, 901 87\, Sweden
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Ume%C3%A5":MAILTO:umea@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220525T130000
DTEND;TZID=Europe/Stockholm:20220525T140000
DTSTAMP:20260407T144710
CREATED:20220507T134201Z
LAST-MODIFIED:20220510T114934Z
UID:10000603-1653483600-1653487200@www.scilifelab.se
SUMMARY:A novel\, antibody-based radiopharmaceutical for advanced thyroid cancer
DESCRIPTION:Presenter: Dr Marika Nestor\, Department of Immunology\, genetics and pathology\, Uppsala University\, Sweden \n\n\n\nMolecular radiotherapy is increasingly becoming a powerhouse in the field of cancer- and radiation therapy. By targeting a structure that is abundant on tumor cells but scarce in healthy tissues\, a cancer-targeting molecule labeled with a therapeutic radionuclide can mediate the delivery of radioactivity specifically to cancer cells. This creates a targeted\, localized form of radiotherapy that combines the advantages of systemic therapy with therapeutically effective radiation. \n\n\n\nIn a collaboration with the Drug Discovery & Development platform at Science for Life Laboratory\, we have developed an antibody-based radiopharmaceutical for molecular radiotherapy of advanced thyroid carcinoma. The project spans over the whole early development chain; from preclinical innovation in the lab\, dosimetry and proof-of-concept in animal models\, to upscaled production and preparations for first-in-man studies. \n\n\n\nDr Nestor in her presentation will discuss the process from innovation to implementation of the project\, both from a research and a commercialization perspective. \n\n\n\nsign up here\n\n\n\nMarika Nestor leads a translational research group at the Department of Immunology\, Genetics and Pathology\, Uppsala University. Her research group focuses on radionuclide targeting and radiosensitization of cancer cells. She obtained her PhD at Uppsala University in 2006\, and became an Associate Professor in 2012. In 2013 she was awarded the Göran Gustafsson prize for young scientists\, in 2016 the Junior Investigator Award from the Swedish Cancer Society\, and in 2020 the Senior Investigator Award. In 2019\, she was awarded a grant from Sweden’s innovation agency VINNOVA to facilitate clinical translation of her findings\, as well as an Attractive Innovation Award by UU Innovation.
URL:https://www.scilifelab.se/event/a-novel-antibody-based-radiopharmaceutical-for-advanced-thyroid-cancer/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220530T160000
DTEND;TZID=Europe/Stockholm:20220530T170000
DTSTAMP:20260407T144710
CREATED:20220421T091500Z
LAST-MODIFIED:20220421T112618Z
UID:10000588-1653926400-1653930000@www.scilifelab.se
SUMMARY:FAIRPoints-Enhancing Sample Provenance and Experimental Reproducibility
DESCRIPTION:Location: Online via Zoom \n\n\n\n\n\nSee Event in your Time Zone \n\n\n\nSpeaker: Rory Macneil  \n\n\n\nLack of reliable information about sample usage\, location\, provenance\, metadata and experimental use is a core barrier to experimental reproducibility and general FAIRification of data. This presentation will describe how these issues are being addressed in the design and development of a sample management module within the RSpace electronic lab notebook\, focusing on three specific challenges: (1) Incorporating sample data into experimental documentation; (2) Associating PIDS like IGSNs and RRIDS into sample metadata; and (3) Export of sample metadata in required formats to different domain repositories and databases.  \n\n\n\nFAIRPoints is an event series highlighting pragmatic measures developed by the community towards the implementation of the FAIR (Findable\, Accessible\, Interoperable\, Reusable) data principles\, in collaboration with GoFAIR US\, SDSC\, AGU\, and SciLifeLab Data Centre. \n\n\n\nSpeaker bio: \n\n\n\nRory Macneil is CEO of Research Space\, which provides RSpace\, an electronic lab notebook and research data management platform\, and host of the FAIR Data Podcast.  In these roles\, and through participation in organizations and forums like the Research Data Alliance\, numerous conferences and events\, and conversations with researchers\, research data managers\, policy makers\, funders\, and tools developers\, he enjoys exploring practical ways in which FAIRification of data can be advanced. \n\n\n\n\n\n\n\nRegister here\n\n\n\nSign up for future events here \n\n\n\nTwitter: @FAIR_Points
URL:https://www.scilifelab.se/event/fairpoints-sample-provenance/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220531T130000
DTEND;TZID=Europe/Stockholm:20220531T140000
DTSTAMP:20260407T144710
CREATED:20220517T144221Z
LAST-MODIFIED:20220518T143138Z
UID:10000609-1654002000-1654005600@www.scilifelab.se
SUMMARY:Webinar: Funding and support from Novo Nordisk Foundation and BioInnovation Institute
DESCRIPTION:SciLifeLab invites the Novo Nordisk Foundation and the BioInnovation Institute (BII) to a webinar where they will present organizations\, grant and funding instruments\, upcoming programs and tips and tricks for a successful application. \n\n\n\n\n\n\n\nMAY 31\, at 13:00 – 14:00 \n\n\n\nThe Novo Nordisk Foundation is an international foundation focusing on improving people’s lives and sustainability of the society. The Foundation awards grants for research projects based on applications it receives in open competition and for strategic projects for which the Foundation takes the initiative. The Foundation has two grant instruments within Innovation\, the Pioneer innovator Grant and the Distinguished Innovator Grant\, both of which are open for researchers in the Nordic countries.  \n\n\n\n\n\n\n\nBioInnovation Institute (BII) is an international commercial foundation with a non-profit objective supported by the Novo Nordisk Foundation. BII operates an incubator to accelerate world-class life science innovation that drives the development of new solutions through the creation of life science start-ups for the benefit of people and society. BII offers help to early-stage projects and start-ups in health tech\, bio-industrials and therapeutics through their various programs. They can provide funding up to 2.5m euros. They are open for applications twice a year. September is the next deadline for applications.  \n\n\n\n\n\n\n\nRegister for the Webinar\, May 31\n\n\n\nRegistration\n\n\n\n\n\n\n\nFollowing event:\n\n\n\nSciLifeLab BII pitch days\n\n\n\nJune 16\, 14:00-17:00 and June 17\, 10:00-12:00 \n\n\n\nThe webinar on May 31\, is followed by two pitch days where researchers are given the opportunity to pitch their ideas to the BII team. The purpose is to get feedback and guidance from business developers on your idea and to learn if your project could be a fit for their different innovation programes and funding instruments.  \n\n\n\nRead more
URL:https://www.scilifelab.se/event/webinar-funding-and-support-from-novo-nordisk-foundation-and-bioinnovation-institute/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="External Relations Office":MAILTO:externalrelations@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220601T080000
DTEND;TZID=Europe/Stockholm:20220602T170000
DTSTAMP:20260407T144710
CREATED:20220210T084528Z
LAST-MODIFIED:20220404T085555Z
UID:10000524-1654070400-1654189200@www.scilifelab.se
SUMMARY:Swedish Microfluidics in Life Science (SMILS) 2022
DESCRIPTION:The Swedish Microfluidics in Life Science meeting gathers researchers in the field of micro- and nanofluidics\, and offers an opportunity to present your research\, to network with researchers at Swedish universities\, institutes and companies\, and to listen to invited talks by a panel of well reputed research leaders. \n\n\n\n\n\n\n\nABSTRACT DEADLINE: APRIL 15\, 2022\n\n\n\n\n\n\n\nREGISTRATION DEADLINE: MAY 25\, 2022\n\n\n\n\n\n\n\nSave the date and please help spread this information in your groups and local networks. \n\n\n\nRegistration\n\n\n\nRead more
URL:https://www.scilifelab.se/event/swedish-microfluidics-in-life-science-smils-2022/
LOCATION:Ångström Laboratory\, Lägerhyddsvägen 1\, Uppsala\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Swedish Microfluidics in Life Sciences":MAILTO:per.augustsson@bme.lth.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220601T100000
DTEND;TZID=Europe/Stockholm:20220601T110000
DTSTAMP:20260407T144710
CREATED:20220524T110815Z
LAST-MODIFIED:20220525T084417Z
UID:10000617-1654077600-1654081200@www.scilifelab.se
SUMMARY:Serial biomarker measurements and cardiovascular disease
DESCRIPTION:Datum: 1 juni\, kl. 10.00 Plats: Biomedicinskt centrum Navet BMC E10:3309\, SciLifeLab Uppsala. Föreläsare: Isabella Kardys Kontaktperson: Agneta Siegbahn Seminarium
URL:https://www.scilifelab.se/event/serial-biomarker-measurements-and-cardiovascular-disease/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Affinity Proteomics":MAILTO:affinity.proteomics-uppsala@scilifelab.uu.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220601T130000
DTEND;TZID=Europe/Stockholm:20220601T170000
DTSTAMP:20260407T144710
CREATED:20220328T072007Z
LAST-MODIFIED:20220524T110502Z
UID:10000570-1654088400-1654102800@www.scilifelab.se
SUMMARY:Biomarkers of Clinical Relevance – The ABC Risk Scores in Cardiovascular Diseases
DESCRIPTION:Symposium on the ABC study\n\n\n\nIn the ABC Risk Score project new tools for precision medicine in cardiovascular diseases have been developed. At this half-day symposium achievements obtained within the project will be presented and discussed. The ABC Risk Score project has been financed for 5 years by the Swedish Foundation for Strategic Research. \n\n\n\nThe symposium is free of charge\, including coffee and some light refreshments.  \n\n\n\nWe kindly ask those who plan to attend the coffee break and evening mingle to register by May 20. \n\n\n\n\n\n\n\n\nREGISTRATION\n\n\n\nPROGRAM
URL:https://www.scilifelab.se/event/biomarkers-of-clinical-relevance-the-abc-risk-scores-in-cardiovascular-diseases/
LOCATION:Martin H:son Holmdahlsalen\, Dag Hammarskjöldsväg 8\, Entrance 100\, Akademiska sjukhuset\, Uppsala
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220601T151500
DTEND;TZID=Europe/Stockholm:20220601T164500
DTSTAMP:20260407T144710
CREATED:20220524T081629Z
LAST-MODIFIED:20220601T073613Z
UID:10000615-1654096500-1654101900@www.scilifelab.se
SUMMARY:POSTPONED - SciLifeLab COVID-19 seminars: Drug repurposing and Precision Medicine - Philip Gribbon & Päivi Östling 
DESCRIPTION:This seminar is unfortunately postponed due to illness – new date not decided yet\n\n\n\nPhilip Gribbon & Päivi Östling\n\n\n\nThe fourth SciLifeLab COVID-19 seminar this spring starts with  Philip Gribbon\, Head of Discovery Research\, Fraunhofer Institute for Translational Medicine and Pharmacology\, Hamburg\, Germany\, talking about ” Compound repurposing in COVID-19\, target and phenotypic-based approaches“. The second talk\, “Exploring the morphology of the host cell to open new possibilities in drug repurposing” will be given by  Päivi Östling\, Department of Oncology-Pathology\, Karolinska InstitutetModerator: Annika Jenmalm Jensen\, SciLifeLab Infrastructure Director \n\n\n\n\n\n\n\nRegister here to Get the Link to the seminar\n\n\n\n\n\n\n\nSchedule\n\n\n\n15:15- 16:00Compound repurposing in COVID-19\, target and phenotypic-based approaches Philip Gribbon Fraunhofer Institute for Translational Medicine and Pharmacology\, Hamburg\, Germany16:00-16:45Exploring the morphology of the host cell to open new possibilities in drug repurposingPäivi Östling Department of Oncology-Pathology\, Karolinska Institutet\n\n\n\n\n\n\n\n\nBIOS and ABSTRACTS
URL:https://www.scilifelab.se/event/scilifelab-covid-19-seminars-philip-gribbon-paivi-ostling/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2021/05/covid_3d_model-min-1536x864-1.jpg
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220607T090000
DTEND;TZID=Europe/Stockholm:20220607T120000
DTSTAMP:20260407T144710
CREATED:20220121T160255Z
LAST-MODIFIED:20220121T160256Z
UID:10000515-1654592400-1654603200@www.scilifelab.se
SUMMARY:BioImage Analysis support - Call4Help
DESCRIPTION:Every 1st week of the month (mainly on Tuesdays\, but there might be exceptions) the BioImage Informatics Facility together with microscopy expert Sylvie Le Guyader (LCI\, Karolinska Institutet) organizes a Call4Help session. The aim is to offer combined expertise towards microscopy and bioimage analysis. All researchers from Swedish institutes can participate. \n\n\n\nThe ideal timepoint to join the Call4Help session is when a researcher has performed pilot experiments and has tried out first analysis approaches – but before having recorded hundreds of images. Combining BIIF’s expertise in BioImage Analysis with microscopy expertise we can discuss ways to record the images that allow analysis afterwards. We will discuss different analysis approaches using mainly open-source software (Fiji\, CellProfiler\, QuPath\, Ilastik\, KNIME)\, but also commercial systems\, if needed (Imaris). \n\n\n\nThe Call4Help session format has been introduced to the BioImage Analysis community by NEUBIAS and ScopeM. \n\n\n\nHow to participate? \n\n\n\nStep1: \n\n\n\nPrepare a short presentation (5-7 min)  – use the following template for your presentation: \n\n\n\nhttp://bit.ly/BIIF_C4H_slideTemplate \n\n\n\nSlide template by NEUBIAS/ScopeM \n\n\n\nStep2: \n\n\n\na) Upload your presentation \n\n\n\nUpload your presentation to a drive of your choice. You can also use our Call4Help google drive. Note that files shared on our Call4Help drive will be available to everyone until the session is over. \n\n\n\nhttp://bit.ly/BIIF_C4H_Drive \n\n\n\nb) Upload example images for testing. \n\n\n\nUpload example images for testing either to the drive of your choice or our Call4Help google drive above. \n\n\n\nhttp://bit.ly/BIIF_C4H_Drive \n\n\n\nc) Register by filling out the registration form: \n\n\n\nhttp://bit.ly/BIIF_C4H_Registration \n\n\n\nStep 3: \n\n\n\nJoin the zoom-session. \n\n\n\nIf your problem is selected for presentation\, you will get a time-slot of 30 – 60 minutes within the session. \n\n\n\nWhat are the Deadlines \n\n\n\nSubmission of a problem and upload of example data: Friday the week before the session. \n\n\n\nNotification about participation: The day before the session. \n\n\n\nNext Call4Help session \n\n\n\nTuesday\, June 7\, 2022\, 9.00-12.00. Deadline for application: Friday\, June 3\, 2022.
URL:https://www.scilifelab.se/event/bioimage-analysis-support-call4help-5/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="Bioimage Informatics Unit":MAILTO:biif@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220607T110000
DTEND;TZID=Europe/Stockholm:20220607T120000
DTSTAMP:20260407T144710
CREATED:20220602T155036Z
LAST-MODIFIED:20220603T141658Z
UID:10000622-1654599600-1654603200@www.scilifelab.se
SUMMARY:SciLifeLab Uppsala PhD&Postdoc seminar
DESCRIPTION:ZOOM link\n\n\n\n\n\n\n\nWelcome to SciLifeLab Uppsala PhD&Postdoc seminars! \nWe are very happy to host exciting talks by PhD students and Postdocs from a great variety of fields within SciLifeLab. \n \nSpeaker 1: Gustav Arvidsson\, Researcher at Jessica Nordlund Lab (Molecular Precision Medicine)\, Dept. of Medical Sciences \nTitle: B-cells in primary Sjögren’s syndrome studied by scRNA-seqSummary: Primary Sjögren’s syndrome (pSS) is an autoimmune disease where the main clinical indication is an increased lymphocyte infiltration to the salivary and lacrimal glands\, leading to a dry mouth and dry eyes. Auto-antibodies to SSA or SSB are present in the majority of the cases and these can often be detected long before symptoms arise. The disease primarily affects middle aged women and while the disease manifestation is mild for most patients about a third develop more severe systemic symptoms and 5% of the patients develop B-cell lymphomas. Given the prominent role of B-cells in the onset and progression of pSS the present study aims to interrogate differences in B-cell subtype composition\, clonotype distribution and gene expression differences between patient subgroups for different B-cell subtypes by means of scRNA-seq. For this purpose\, we have generated gene expression and targeted B-cell receptor libraries for ~230 000 unique purified B-cells from 24 patients and healthy controls which we hope can broaden the understanding of the role of B-cells in pSS. \nSpeaker 2: David Lagman\, Researcher at Dan Larhammar Lab(Pharmacology)\, Dept. of Medical Cell Biology \nTitle: Evolution of genes important for nervous system function in vertebrates with a focus on visionSummary: Whole genome duplications (WGDs) at the base of the vertebrate lineage have over the years been shown to be responsible for the expansion of many gene families that are important in vertebrate central nervous system function. We have previously resolved the evolution of many of these genes in relation to these WGDs\, especially those involved in neuronal\, neuroendocrine\, and visual function. Here\, I will describe our latest results regarding the evolution of cyclic nucleotide gated cation (CNG) channel genes in metazoans. The CNG channels play an important role in vision in vertebrates by being responsible for the hypopolarization of cone and rod photoreceptor cells after the detection of light. Using extensive datamining we have managed to identify four previously unknown CNG channel genes in several invertebrate lineages. We have also managed to\, through detailed analyses of conserved synteny\, accurately assign vertebrate CNG genes to related chromosomal regions providing strong evidence for an expansion in the early vertebrate WGDs. These analyses open up the door for investigations into the function of the novel CNG genes identified in invertebrate genomes. Finally\, I will describe our current endeavor into understanding the evolution of genes involved in long term memory formation and maintenance in vertebrates.
URL:https://www.scilifelab.se/event/scilifelab-uppsala-phdpostdoc-seminar-2/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/05/SciLifeLab-PhDPostdoc-conuncil-poster_landscape_June_07.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220608T100000
DTEND;TZID=Europe/Stockholm:20220608T160000
DTSTAMP:20260407T144710
CREATED:20220314T164411Z
LAST-MODIFIED:20220519T083454Z
UID:10000551-1654682400-1654704000@www.scilifelab.se
SUMMARY:Networking meeting between the Wallenberg programs Data-driven Life Science (DDLS) and WASP-HS
DESCRIPTION:The purpose of the meeting is to explore opportunities for joint and multidisciplinary research ventures between researchers working within data-driven life science and researchers from the humanities and social sciences working on Artificial Intelligence and Autonomous Systems. Information regarding an upcoming call for seed-money for cross-program research collaborations will also be announced at the meeting. Apart from thematic parallel networking sessions\, the program will include a study visit to SciLifeLab. Coffee and lunch will be served. \n\n\n\nDeadline: Registration closes on June 1st at 23:00 \n\n\n\nFor questions about WASP-HS\, please contact tatyana.sarayeva@umu.se \n\n\n\nFor questions about DDLS\, please contact ddls@scilifelab.se \n\n\n\n\n\n\n\nRegistration\n\n\n\n\n\n\n\nProgram\n\n\n\n\n\n\n10:00Site visit to SciLifeLab12:00Lunch13:00WelcomePresentation of the programsWASP-HS: Francis Lee Associate Professor in Science and Technology Studies Chalmers University of TechnologyDDLS: Erik Kristiansson Professor Mathematical Sciences\, Chalmers University of Technology13:20Networking session 1 (select one)1.1. Data Challenges Moderators:WASP-HS: Amanda Lagerkvist\, Professor of Media and Communication Studies\, Uppsala UniversityDDLS: Helga Westerlind\, Assistant professor\, Computational epidemiology\, Karolinska Institutet1.2 Implementation and UseModerators:WASP-HS: Helena Lindgren. Professor in Computer Science\, Umeå UniversityDDLS: Janne Lehtiö\, Professor in medical proteomics\, Karolinska Institutet14:20Break14:50Networking session 2 (select one)2.1 Prediction and Modeling Moderators:WASP-HS: Francis Lee\, Associate Professor in Science and Technology Studies\, Chalmers University of TechnologyDDLS: Erik Kristiansson¸ Professor\, Chalmers University of Technology2.2 Governance and EconomicsModerators:WASP-HS: Liane Colonna\, Assistant professor in law and information technology\, Stockholm UniversityDDLS: Heidi Howard\, Researcher\, Medical Ethics\, Lund University15:50Closing words16:00End of day\n\n\n\n\n\n\n\n\n\n\nTheme descriptions DDLS/WASP-HS networking meeting\n\n\n\nData Challenges\n\n\n\nWASP-HS: Amanda Lagerkvist\, Professor of Media and Communication Studies\, Uppsala University \n\n\n\nDDLS: Helga Westerlind\, Assistant professor\, Computational epidemiology\, Karolinska Institute \n\n\n\nThis theme centers around the ethical\, organizational\, and social challenges around data work. Questions could include for instance: What are the challenges in creating representative datasets for diverse populations? In making data travel between project or countries. Or when old historical data are used to model contemporary phenomena? How do the categories of databases shape the collection of life science data? \n\n\n\nImplementation and Use\n\n\n\nWASP-HS: Helena Lindgren. Professor in Computer Science\, Umeå University \n\n\n\nDDLS: Janne Lehtiö\, Professor in medical proteomics\, Karolinska Institute \n\n\n\nThis theme centers on the ethical\, organizational\, and social challenges around implementation and use. Questions could include for instance: How can the generated medical knowledge be implemented in medical education and clinical practice? What are the legal and ethical implications thereof? How can a patient-centered\, holistic perspective on a patient’s health situation be maintained (balancing data-driven bio-centric assessments with clinical findings)?How can the computational instruments explain their grounds for output (classification\, assessment\, diagnosis\, or prediction) to a clinician or patient? \n\n\n\nPrediction and Modeling\n\n\n\nWASP-HS: Francis Lee\, Associate Professor in Science and Technology Studies\, Chalmers University of Technology \n\n\n\nDDLS: Erik Kristiansson\, Professor\, Chalmers University of Technology \n\n\n\nThis theme centers on the ethical\, organizational\, and social challenges around prediction and modeling. Questions could include for instance: What are the ethical and social issues in modelling and forecasting.What are the challenges for model reuse from different domains? What are the challenges of using ”ground truth datasets” to assess model fit for real data cases.  \n\n\n\nGovernance and Economics\n\n\n\nWASP-HS: Liane Colonna\, Assistant professor in law and information technology\, Stockholm University \n\n\n\nDDLS: Heidi Howard\, Researcher\, Medical Ethics\, Lund University \n\n\n\nThis theme centers on the legal\, organizational\, and governance challenges around data-driven life science. Questions could include for instance: Legal aspects of data (use\, reuse\, transfer\, sharing etc) What is/could be/should be the big picture (non-technical) model of data governance at DDLS? What are the fundamental assumptions\, expectations and procedures accepted by stakeholders? 
URL:https://www.scilifelab.se/event/networking-meeting-between-the-wallenberg-programs-data-driven-life-science-ddls-and-wasp-hs/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220608T151500
DTEND;TZID=Europe/Stockholm:20220608T164500
DTSTAMP:20260407T144710
CREATED:20220601T100310Z
LAST-MODIFIED:20220608T062213Z
UID:10000620-1654701300-1654706700@www.scilifelab.se
SUMMARY:SciLifeLab COVID-19 seminars: Male sex bias in severe COVID-19 outcomes- Claire Deakin and Jan Dumanski
DESCRIPTION:The last SciLifeLab COVID-19 seminar this spring starts with Claire Deakin\, Director of Research and Biostatistics at OPAL Rheumatology\, Australia\, and part-time Senior Research Associate in the Centre for Adolescent Rheumatology Versus Arthritis at University College London\, talking about Male sex bias in severe COVID19 outcomes and sex differences in infection\, immunity and autoimmunity. The second talk\, Loss of Y in leukocytes as a risk factor for critical course of COVID-19 in men\, will be given by Jan Dumanski\, Professor\, Uppsala UniversityModerator: Disa Larsson Hammarlöf\, SciLifeLab Research Coordinator \n\n\n\n\n\n\n\nRegister here to Get the Link to the seminar\n\n\n\n\n\n\n\nSchedule\n\n\n\n15:15- 16:00Male sex bias in severe COVID19 outcomes and sex differences in infection\, immunity and autoimmunityClaire Deakin\, Director of Research and Biostatistics at OPAL Rheumatology\, Australia16:00-16:45Loss of Y in leukocytes as a risk factor for critical course of COVID-19 in menJan Dumanski\, Uppsala University\n\n\n\n\n\n\n\n\nBIOS and ABSTRACTS
URL:https://www.scilifelab.se/event/scilifelab-covid-19-seminars-genetic-aberrations-and-covid-claire-deakin-and-jan-dumanski/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2021/05/covid_3d_model-min-1536x864-1.jpg
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220610T130000
DTEND;TZID=Europe/Stockholm:20220610T140000
DTSTAMP:20260407T144710
CREATED:20220601T125242Z
LAST-MODIFIED:20220602T140459Z
UID:10000621-1654866000-1654869600@www.scilifelab.se
SUMMARY:The Tara Oceans Expedition: Swimming in environmental genomics data 
DESCRIPTION:Prof. Pascal Hingamp\n\n\n\nAix-Marseille University \n\n\n\n \n\n\n\nThe National Graduate School for Medical Bioinformatics welcomes you to a seminar by Pascal Hingamp\, from Aix-Marseille University. \n\n\n\nTitle: “The Tara Oceans Expedition:  swimming in environmental genomics data.”  \n\n\n\nHope to see you there!  \n\n\n\n \n\n\n\n\n\nJoin Virtually\n\n\n\n\nhttps://stockholmuniversity.zoom.us/j/2207537839
URL:https://www.scilifelab.se/event/the-tara-oceans-expedition-swimming-in-environmental-genomics-data/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="National Graduate School in Medical Bioinformatics":MAILTO:samuel.flores@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220616T140000
DTEND;TZID=Europe/Stockholm:20220617T120000
DTSTAMP:20260407T144710
CREATED:20220517T151853Z
LAST-MODIFIED:20220609T101837Z
UID:10000610-1655388000-1655467200@www.scilifelab.se
SUMMARY:SciLifeLab BII pitch days
DESCRIPTION:SciLifeLab is offering Swedish researchers the opportunity to pitch their innovative ideas to a team of business developers from the Danish BioInnovation Institute. The purpose is to get feedback and guidance on your idea and to learn if your project could be a fit for their different innovation programs and funding instruments.  \n\n\n\nBioInnovation Institute (BII) is an international commercial foundation with a non-profit objective supported by the Novo Nordisk Foundation. BII operates an incubator to accelerate world-class life science innovation that drives the development of new solutions through the creation of life science start-ups for the benefit of people and society. BII offers help to early-stage projects and start-ups in health tech\, bio-industrials and therapeutics through their various programs. They can provide funding up to 2.5m euros. They are open for applications twice a year. September is the next deadline for applications.  \n\n\n\nTwo pitch days will be offered:  \n\n\n\nJune 16\, 14:00-17:00 \n\n\n\nJune 17\, 10:00-12:00 \n\n\n\nA pre-selection will be made by BII among the researchers and projects registering their interest for the pitching. Projects selected to pitch will be given a time slot of 30 minutes on the preferred day. The slot should be used for a 15 minutes pitch followed by 15 minutes discussion.  \n\n\n\nRegistration of interest\n\n\n\nDeadline to register is June 12\, 23:59. \n\n\n\nFor questions\, contact externalrelations@scilifelab.se
URL:https://www.scilifelab.se/event/scilifelab-bii-pitch-days/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="External Relations Office":MAILTO:externalrelations@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220617T093000
DTEND;TZID=Europe/Stockholm:20220617T110000
DTSTAMP:20260407T144710
CREATED:20220519T125514Z
LAST-MODIFIED:20220616T130804Z
UID:10000612-1655458200-1655463600@www.scilifelab.se
SUMMARY:Affinity Proteomics mini-symposium
DESCRIPTION:See how Simoa technology is changing the world of research. Connect with researchers interested in using Simoa technology. Learn how to find reference labs with access to Simoa. Hear from Quanterix scientists and Simoa users. Tour a lab to see our instruments in a lab setting.v \n\n\n\n\n\n\n\n\n\n\n\nProgram\n\n\n\n09:30 – 09:45 Welcome and IntroductionDr. Paula Perin\, Quanterix (moderator)Dr. Claudia Fredolini\, Affinity Proteomics Unit\, Scilifelab\, KTH Royal Institute of Technology09:45 – 10:00 Introduction to the Simoa technology.Eva Ramos\, PhD\, Quanterix10:00 – 10:30 A blood test for Alzheimer´s disease – the ultrasensitive detection of phosphorylated tau.Dr. Laia Montoliu Gaya\, University of Gothenburg.10:30 – 11:00 Intracellular peptide measurements in Alzheimer’s Disease.Dr. Erik Christensen\, Pre-Diagnostics AS11:00 Lunch (included upon registration and confirmation of interest)Register here to attend remotely or in person
URL:https://www.scilifelab.se/event/simoa-mini-symposia/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Affinity Proteomics":MAILTO:affinity.proteomics-uppsala@scilifelab.uu.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220617T113000
DTEND;TZID=Europe/Stockholm:20220617T121500
DTSTAMP:20260407T144710
CREATED:20220608T073241Z
LAST-MODIFIED:20220608T114734Z
UID:10000623-1655465400-1655468100@www.scilifelab.se
SUMMARY:Call for new drug discovery projects - New SciLifeLab Capability for DNA encoded chemical libraries
DESCRIPTION:Call for new drug discovery projects to SciLifeLab DDD for the fall 2022 and introduction of a SciLifeLab capability for DNA encoded chemical libraries \n\n\n\nThe Drug Discovery and Development platform at SciLifeLab (DDD) opens for new project applications for the fall 2022. New proposals will be accepted for all therapeutic modalities that are currently part of the DDD offer\, i.e. small molecules\, biologics (antibodies\, proteins\, etc)\, or therapeutic oligonucleotides.  \n\n\n\nIn this presentation\, we will zoom in on selection of small molecule protein binders from enormously large DNA encoded chemical libraries containing >5 Billion physical small molecules. \n\n\n\nMost welcome! \n\n\n\nRegister to receive zoom link\n\n\n\nCall application form
URL:https://www.scilifelab.se/event/call-for-new-drug-discovery-projects-new-scilifelab-capability-for-dna-encoded-chemical-libraries/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220623T130000
DTEND;TZID=Europe/Stockholm:20220623T140000
DTSTAMP:20260407T144710
CREATED:20220622T074843Z
LAST-MODIFIED:20220622T074914Z
UID:10000633-1655989200-1655992800@www.scilifelab.se
SUMMARY:Human systems immunomonitoring for precision medicine
DESCRIPTION:Please join us to listen to Petter Brodin\,Karolinska Institutet   \n\n\n\n \n\n\n\nHuman systems immunomonitoring for precision medicine \n\n\n\nTrippelrummet Navet\, BMC Thursday 23rd of June 2022  \n\n\n\n \n\n\n\nHost: Ulf Landegren
URL:https://www.scilifelab.se/event/human-systems-immunomonitoring-for-precision-medicine/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Event":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220815T113000
DTEND;TZID=Europe/Stockholm:20220815T121500
DTSTAMP:20260407T144710
CREATED:20220615T132143Z
LAST-MODIFIED:20220622T114102Z
UID:10000625-1660563000-1660565700@www.scilifelab.se
SUMMARY:Calls for new project support in chemical biology and drug discovery
DESCRIPTION:The chemical biology unit (CBCS) and the Drug discovery and development (DDD) platform at SciLifeLab have calls out for projects. \n\n\n\nCBCS is looking for projects in Chemical Biology which includes assay development for small molecule screening and profiling\, as well as enabling chemistry. For more information\, please visit www.cbcs.se. \n\n\n\nThe DDD platform has a call looking for new project proposals for drug discovery. All therapeutic modalities that can be developed in collaboration with the DDD platform at SciLifeLab are of interest\, including small molecules\, antibodies\, oligonucleotides and new modalities. \n\n\n\nSome users and projects are at the intersection between chemical biology and drug discovery.This webinar aims to guide users to the call that best suits the needs of their project. \n\n\n\nRegistration
URL:https://www.scilifelab.se/event/calls-for-new-project-support-in-chemical-biology-and-drug-discovery/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220823T090000
DTEND;TZID=Europe/Stockholm:20220823T120000
DTSTAMP:20260407T144710
CREATED:20220622T145418Z
LAST-MODIFIED:20220622T145419Z
UID:10000637-1661245200-1661256000@www.scilifelab.se
SUMMARY:BioImage Analysis support – Call4Help
DESCRIPTION:Every month (mainly on Tuesdays\, but there might be exceptions) the BioImage Informatics Facility together with microscopy expert Sylvie Le Guyader (LCI\, Karolinska Institutet) organizes a Call4Help session. The aim is to offer combined expertise towards microscopy and bioimage analysis. All researchers from Swedish institutes can participate. \nThe ideal timepoint to join the Call4Help session is when a researcher has performed pilot experiments and has tried out first analysis approaches – but before having recorded hundreds of images. Combining BIIF’s expertise in BioImage Analysis with microscopy expertise we can discuss ways to record the images that allow analysis afterwards. We will discuss different analysis approaches using mainly open-source software (Fiji\, CellProfiler\, QuPath\, Ilastik\, KNIME)\, but also commercial systems\, if needed (Imaris). \nThe Call4Help session format has been introduced to the BioImage Analysis community by NEUBIAS and ScopeM. \n  \nHow to participate? \nStep1: \nPrepare a short presentation (5-7 min)  – use the following template for your presentation: \nhttp://bit.ly/BIIF_C4H_slideTemplate \nSlide template by NEUBIAS/ScopeM \nStep2: \n\na) Upload your presentation \n\n  \nUpload your presentation to a drive of your choice. You can also use our Call4Help google drive. Note that files shared on our Call4Help drive will be available to everyone until the session is over. \nhttp://bit.ly/BIIF_C4H_Drive \n\nb) Upload example images for testing. \n\nUpload example images for testing either to the drive of your choice or our Call4Help google drive above. \nhttp://bit.ly/BIIF_C4H_Drive \n\nc) Register by filling out the registration form: \n\nhttp://bit.ly/BIIF_C4H_Registration \nStep 3: \nJoin the zoom-session. \nIf your problem is selected for presentation\, you will get a time-slot of 30 – 60 minutes within the session. \n  \nWhat are the Deadlines \nSubmission of a problem and upload of example data: Friday the week before the session. \nNotification about participation: The day before the session. \nNext Call4Help session: Tuesday\, August 23\, 2022\, 9.00-12.00 \nDeadline for application: Friday\, August 19\, 2022
URL:https://www.scilifelab.se/event/bioimage-analysis-support-call4help-6/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="Bioimage Informatics Unit":MAILTO:biif@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220901T090000
DTEND;TZID=Europe/Stockholm:20220901T160000
DTSTAMP:20260407T144710
CREATED:20220621T143720Z
LAST-MODIFIED:20220623T115813Z
UID:10000632-1662022800-1662048000@www.scilifelab.se
SUMMARY:InfraLife integrative structural biology - Open Day
DESCRIPTION:Save the date for a super Thursday! \n\n\n\nJoin in on the InfraLife integrative structural biology course\, open lectures Thursday sept 1st 2022. Lessons on modelling/computational methods and scientific key note: Feel free to join the course participants in lecture hall Air&Fire Campus Solna. \n\n\n\n9.00-10.30  \n\n\n\nDifferent approaches to the study of cotranslational protein foldingProfessor Gunnar von Heijne\, Stockholm University\,  \n\n\n\n10:45-12:00 \n\n\n\nThe protein structure prediction problem: from Anfinsen to AlphaFold.Principal Research Engineer Claudio Mirabello\,NBIS\, Linköping University\,  \n\n\n\n13:00-14:00 \n\n\n\nCoupling lipid nanoparticle structure and compositionResearch Specialist Hanna Barriga\, Karolinska Institutet \n\n\n\n14:00-15:00 \n\n\n\nIntegrative structural biology: Combining cryo-EM\, simulations and electrophysiology to understand membrane protein functionsProfessor Erik Lindahl\, Stockholm University \n\n\n\n15:15-16:00 \n\n\n\nIntegrating physics-based and evolutionary modelling to investigate the conformational dynamics of membrane proteinsAssociate professor Lucie Delemotte\, KTH\,  \n\n\n\nFollowed by SciLifeLab pub and InfraLife course poster sessions
URL:https://www.scilifelab.se/event/infralife-integrative-structural-biology-open-day/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="InfraLife":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220902T110000
DTEND;TZID=Europe/Stockholm:20220902T120000
DTSTAMP:20260407T144710
CREATED:20220818T143018Z
LAST-MODIFIED:20220823T164130Z
UID:10000647-1662116400-1662120000@www.scilifelab.se
SUMMARY:Computer simulations of complex biological systems
DESCRIPTION:Welcome to a lecture by Professor Carmen Domene\, University of Bath\, UK.11.00-12.00 Friday September 2nd 2022 in Air&Fire lecture hall  \n\n\n\nSciLifeLab Campus Solna\, Tomtebodavägen 23. \n\n\n\nProf Domene’s research uses computational techniques to study the structure and dynamics of biological systems aiming to understand biochemical and biophysical processes from a microscopic perspective and thereby aid in interpreting and devising experiments.  \n\n\n\n \n\n\n\nA keynote lecture part if the InfraLife integrative structural biology course 2022
URL:https://www.scilifelab.se/event/computational-techniques-to-study-the-structure-and-dynamics-of-biological-systems/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2021/05/Infralife-square.jpg
ORGANIZER;CN="InfraLife":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220906T120000
DTEND;TZID=Europe/Stockholm:20220906T130000
DTSTAMP:20260407T144710
CREATED:20220831T130706Z
LAST-MODIFIED:20220905T112721Z
UID:10000661-1662465600-1662469200@www.scilifelab.se
SUMMARY:Instruments and methods at Umeå Centre for Electron Microscopy (UCEM)
DESCRIPTION:In the frame of the “SciLifeLab Site Umeå / KBC Infrastructure Seminar Series”\, the seminars will be organised every second Tuesday during autumn 2022\, in turn with IceLab Lunch Pitches. The seminars will be held in a hybrid format IRL in Glasburen\, KBC\, and online via Zoom. Take the chance to get information on facilities\, possibilities and services that infrastructure\, both SciLifeLab-associated and local\, can offer! Learn more about the seminar series and the schedule for autumn 2022 here. \n\n\n\nOn September 6th\, 12:00-13:00\, you are welcome to participate in the seminar \n\n\n\nInstruments and methods at Umeå Centre for Electron Microscopy (UCEM)\n\n\n\nby Linda Sandblad\, Centre Coordinator / Director \n\n\n\nRead more\n\n\n\nA guided tour to the UCEM facility could be organised for on-site participants after the seminar. \n\n\n\nRegistration:  \n\n\n\nSign up (latest by September 5th\, 10 a.m.) for on-site attendance to reserve your free lunch sandwich: \n\n\n\nor follow online via Zoom: https://umu.zoom.us/j/63138997026 (registration is not required). \n\n\n\nOrganisers: SciLifeLab Site Umeå and Chemical Biological Centre (KBC)
URL:https://www.scilifelab.se/event/instruments-and-methods-at-umea-centre-for-electron-microscopy-ucem/
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Ume%C3%A5":MAILTO:umea@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220907T140000
DTEND;TZID=Europe/Stockholm:20220907T150000
DTSTAMP:20260407T144710
CREATED:20220826T140811Z
LAST-MODIFIED:20220829T151653Z
UID:10000654-1662559200-1662562800@www.scilifelab.se
SUMMARY:Single-cell and spatial atlases of the adult and developing human brain
DESCRIPTION:Recently\, we have generated single-cell atlases of the adult and developing human brain using a combination of single-cell RNA sequencing and spatial transcriptomics. In the adult\, we found an unexpectedly high diversity of neuronal types especially in the midbrain and hindbrain\, with conservatively more than 3000 distinct types. In the developing human brain\, we revealed highly refined trajectories of differentiation of cortical neurons. We further found that astrocytes and oligodendrocytes were regionally patterned\, and that these region-specific types persisted in the adult. These findings may provide a basis for the brain region-specific occurrence of pediatric brain tumors. \n\n\n\n– \n\n\n\nSpeaker\n\n\n\nSten LinnarssonResearch Division of Molecular Neurobiology\, Karolinska Institutet\, Stockholm\, Sweden  \n\n\n\nHuman Developmental Dell Atlas (HDCA) is the Swedish effort within the human cell atlas (HCA)\, one of the largest international scientific projects. The project aim is to create a comprehensive molecular atlas of human prenatal development at the molecular resolution using state-of-the-art multi-omic technologies such as single-cell RNA-seq\, Spatial Transcriptomics\, in situ sequencing in order to provide deeper insight into how variations and deviations contribute to health and disease. \n\n\n\nThe HDCA Seminar Series 2022 invites you to join us on a journey of early human organogenesis of several organs at the single-cell and spatial resolution. Seminars will be held at SciLifeLab Gamma building on Wednesdays at 14:00 or 15:00 and also via Zoom. After each seminar\, we will have up to 30 min round up discussions with the speaker on how you can contribute to the atlas! \n\n\n\naccess zoom meeting
URL:https://www.scilifelab.se/event/single-cell-and-spatial-atlases-of-the-adult-and-developing-human-brain/
LOCATION:Gamma 2 Lunchroom\, SciLifeLab\, Tomtebodavägen 23\, Solna\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/08/logo_hdca.png
ORGANIZER;CN="The Human Developmental Cell Atlas":MAILTO:hdca-sweden@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220908T080000
DTEND;TZID=Europe/Stockholm:20220908T120000
DTSTAMP:20260407T144710
CREATED:20220906T102938Z
LAST-MODIFIED:20220906T103014Z
UID:10000671-1662624000-1662638400@www.scilifelab.se
SUMMARY:SciLifeLab Symposium in Microscale Acoustofluidics for Life Sciences
DESCRIPTION:SciLifeLab Symposium in Microscale Acoustofluidics for Life Sciences\, Sept. 8th 2022Organizers: Martin Wiklund (KTH) and Thomas Laurell (Lund University) \n\n\n\nLocation: Scilifelab\, Air/Fire\, Gamma-2\, Tomtebodavägen 23\, Solna \n\n\n\nProgram\n\n\n\n \n\n\n\nSession 1 (Air/Fire) \n\n\n\n08:20-08:30 Opening by Martin Wiklund\, KTH-Biophysics \n\n\n\n08.30-08.45 Cecilia Magnusson\, Lund\, ”Acoustic label-free isolation of circulating tumor cells in metastatic prostate cancer” \n\n\n\n08.45-09.00 Megan Havers\, Lund\, ”Silica seed particles improves performance in acoustic nanoparticle trapping” \n\n\n\n09.00-09.15 Axel Broman\, Lund\, ”Acoustic trapping for isolation of extracellular vesicles” \n\n\n\n09.15-09.30 Björn Hammarström\, KTH\, ”Acoustic focusing of protein crystals for improved sample delivery in serial crystallography” \n\n\n\n09.30-09.45 Thierry Baasch\, Lund\, ”High-throughput acoustic particle separation” \n\n\n\n09.45-10.00 Wei Qiu\, Lund\, ”High-performance bulk-wave-acoustophoresis devices using side actuation” \n\n\n\n10.00-10.30 coffee break (lobby outside Air/Fire) \n\n\n\nSession 2 (Air/Fire) \n\n\n\n10.30-10.45 Po-yin Chen\, Lund\, ”Microfluidic droplet shooter as a sample injection interface for MS” \n\n\n\n10.45-11.00 Niklas Sandström\, KTH\, ”Microwells for live cell assays” \n\n\n\n11.00-11.15 Valentina Carannante\, KTH-KI\, ”Multiplexed high-content screening of drug and immune sensitivity in microwells” \n\n\n\n11.15-11.30 Karl Olofsson\, KTH\, ”Multicellular tumor diskoids: A solid tumor model optimized for imaging” \n\n\n\n11.30-11.45 Giovanni Marinaro\, Lund\, “Design of acoustically-controlled ultrasmall droplet ejection in a microfluidic chip”
URL:https://www.scilifelab.se/event/scilifelab-symposium-in-microscale-acoustofluidics-for-life-sciences-sept-8th-2022/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Martin Viklund":MAILTO:martin.wiklund@biox.kth.se
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BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220908T120000
DTEND;TZID=Europe/Stockholm:20220909T120000
DTSTAMP:20260407T144710
CREATED:20220616T150853Z
LAST-MODIFIED:20220915T092128Z
UID:10000626-1662638400-1662724800@www.scilifelab.se
SUMMARY:Data-Driven Evolution and Biodiversity Research
DESCRIPTION:Mini-symposium \n\n\n\nWelcome to the first mini-symposium in data-driven evolution and biodiversity research sponsored by the Data-Driven Life Science (DDLS) program! At the mini-symposium\, the first group of DDLS Fellows in evolution and biodiversity will present themselves and their research plans. There will be several inspiring keynote talks\, presentations of the Swedish infrastructure for data-driven research in evolution and biodiversity\, and discussions of the future of the DDLS program. \n\n\n\nJoin us for an inspiring lunch-to-lunch meeting\, and help shape the future of data-driven evolution and biodiversity research in Sweden! \n\n\n\n\n\n\n\nHybrid event\n\n\n\nParticipate on site: New venue! Europasalen\, Konferenscentrum Wallenberg\, Medicinaregatan 20A\, Gothenburg\, Sweden. \n\n\n\nParticipate online: Online participation info\, e.g\, zoom link will be sent out upon registration \n\n\n\n\n\n\n\nDownload the Program here (PDF)  \n\n\n\nRegistration\n\n\n\n\n\n\n\nShort program\n\n\n\nThursday\, September 8\n\n\n\n12:00Lunch13:00Symposium starts (first day)17:00End of first day19:00SYMPOSIUM DINNER at Koks\, Vasagatan 9\, GothenburgAttendance is optional and the cost is the participant’s responsibility.\n\n\n\nFriday\, September 9\n\n\n\n08:30Symposium starts (second day)12:00Lunch\, end of the symposium\n\n\n\n\n\nPractical information\n\n\n\nIT support and adaptors will be available for presentersDeadline for onsite registration is August 29 (due to catering). Zoom registrations can be done until the event starts day 2.Lodging for September 8th is the attendee’s responsibility\, and there are many different kinds of options nearby the site. The speakers are booked at Hotel Poseidon.
URL:https://www.scilifelab.se/event/data-driven-evolution-and-biodiversity-research/
LOCATION:Europasalen\, Konferenscentrum Wallenberg\, Gothenburg\, Medicinaregatan 20\, Göteborg\, 413 90\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/06/AdobeStock_280363678-scaled.jpeg
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BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220912T160000
DTEND;TZID=Europe/Stockholm:20220912T170000
DTSTAMP:20260407T144710
CREATED:20220905T092433Z
LAST-MODIFIED:20220914T005440Z
UID:10000669-1662998400-1663002000@www.scilifelab.se
SUMMARY:Clinical (phospho)-proteomics for precision medicine
DESCRIPTION:Clinical (phospho)proteomics for precision medicine \n\n\n\nWelcome to a lecture by Professor Connie R Jimenez\, Amsterdam University Medical Center\, Netherlands \n\n\n\n16.00-17.00 Monday September 12Air & Fire (Gamma 2) or via zoom https://kth-se.zoom.us/s/69393882589\n\n\n\n\n\n\n\nConnie Jimenez is Professor of Translational OncoProteomics at the Amsterdam University Medical Center in The Netherlands\, where she is heading the OncoProteomics Laboratory as well as the Proteomics Core Facility. \n\n\n\nShe is a molecular/cellular biologist with focus on the global analysis of the functional building blocks of life\, i.e.\, the proteins which activity and functions are highly deranged in disease. Her lab’s mission is to apply innovative mass spectrometry-based proteomics and data analysis to obtain systems biology insights into disease and to improve early diagnostics and treatment\, most notably of cancer and neurodegenerative disease. \n\n\n\nDuring her graduate studies at the Vrije Universiteit in Amsterdam (1993-1997)\, she pioneered single cell peptide profiling by mass spectrometry. During her post-doc in the Burlingame lab at UCSF\, San Francisco ((1997-1999)\, she applied proteomics to study neuron differentiation. In 2006\, she founded the OncoProteomics Laboratory (www.oncoproteomics.nl) with a start-up grant of the Cancer Center Amsterdam. \n\n\n\nTo date\, Dr. Jimenez (co)authored > 200 scientific peer reviewed articles. Underscoring her (inter)national esteem\, she founded the Netherlands Proteomics Platform in 2000 and is member of its steering board; she is general council member of the European Proteomics Association since 2005 and elected Vice-President since 2021; she is member of the steering committee of the Cancer HPP project of the Human Proteome Organisation. Finally\, she is editorial board member of several leading proteomics journals. \n\n\n\nThis keynote lecture is part of the FEBS Advanced Course – Exploring the Human Proteome
URL:https://www.scilifelab.se/event/clinical-phosphoproteomics-for-precision-medicine/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/04/FEBS-Advanced-course.png
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BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220913T130000
DTEND;TZID=Europe/Stockholm:20220913T150000
DTSTAMP:20260407T144710
CREATED:20220622T110134Z
LAST-MODIFIED:20220912T074601Z
UID:10000635-1663074000-1663081200@www.scilifelab.se
SUMMARY:Spatial and Single Cell Biology Webinar
DESCRIPTION:The Spatial and Single Cell Biology Platform at SciLifeLab invites you to a virtual event where you can learn about the service we provide within the field of spatial and single cell omics. Take the opportunity to learn about cutting edge methods including spatial transcriptomics with Visium\, in situ sequencing\, spatial proteomics using highly multiplexed imaging\, spatial metabolomics with MALDI imaging and advanced FISH technologies. The presentations will be given by our experts in there respective methods\, working within the platform.  \n\n\n\nThe event is open for anyone to attend\, who are interested in including spatial omics in their research projects or with a general interest to learn about the methods. \n\n\n\nregister here\n\n\n\n\n\n\n\nProgram\n\n\n\n13:00 Short introduction to the Spatial and Single Cell Biology platform13:10 Single cell sequencing  Anja Mezger13:25Spatial Transcriptomics  Xesus Abalo13:40In situ sequencing  Chika Yokota13:55Spatial Proteomics (multiplexed IF) Charlotte Stadler14:10Advanced FISH Technologies Quentin Verron14:25Spatial Mass Spectrometry Anna Nilsson14:40Additional Q&A and end of webinar
URL:https://www.scilifelab.se/event/spatial-and-single-cell-biology-webinar/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="Spatial and Single Cell Biology Platform":MAILTO:charlotte.stadler@scilifelab.se
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BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220913T150000
DTEND;TZID=Europe/Stockholm:20220913T164500
DTSTAMP:20260407T144710
CREATED:20220630T181908Z
LAST-MODIFIED:20220818T095034Z
UID:10000639-1663081200-1663087500@www.scilifelab.se
SUMMARY:SciLifeLab Navet Open House
DESCRIPTION:Welcome to SciLifeLab Navet Open House on September 13 from 15:00 to learn more about SciLifeLab and the possibility to book meetings in Navet. Take the chance to network and talk science! \n\n\n\n\n\nSome of the activities:• General presentation of SciLifeLab 15:30\, E10:1309\, Jenny Alfredsson\, Acting Head of Operations• A Quiz tour as a walk around Navet’s meeting rooms 15:00 – 16:00. Price ceremony at 16:15• SciLifeLab poster exhibition• Mingle photographer on site• Relaxed networking with the opportunity to meet several SciLifeLab representatives on site \n\n\n\nIf SciLifeLab representatives want to participate in the poster exhibition\, please contact lokalbokning@SciLifeLab.uu.se. \n\n\n\n\n\n\n\nFor catering reasons\, please Register here
URL:https://www.scilifelab.se/event/scilifelab-navet-open-house/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/06/Navet-fasad-innegård-scaled.jpg
ORGANIZER;CN="Operations office":MAILTO:events@SciLifeLab.se
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END:VCALENDAR