BEGIN:VCALENDAR VERSION:2.0 PRODID:-//SciLifeLab - ECPv6.15.18//NONSGML v1.0//EN CALSCALE:GREGORIAN METHOD:PUBLISH X-ORIGINAL-URL:https://www.scilifelab.se X-WR-CALDESC:Events for SciLifeLab REFRESH-INTERVAL;VALUE=DURATION:PT1H X-Robots-Tag:noindex X-PUBLISHED-TTL:PT1H BEGIN:VTIMEZONE TZID:Europe/Stockholm BEGIN:DAYLIGHT TZOFFSETFROM:+0100 TZOFFSETTO:+0200 TZNAME:CEST DTSTART:20220327T010000 END:DAYLIGHT BEGIN:STANDARD TZOFFSETFROM:+0200 TZOFFSETTO:+0100 TZNAME:CET DTSTART:20221030T010000 END:STANDARD BEGIN:DAYLIGHT TZOFFSETFROM:+0100 TZOFFSETTO:+0200 TZNAME:CEST DTSTART:20230326T010000 END:DAYLIGHT BEGIN:STANDARD TZOFFSETFROM:+0200 TZOFFSETTO:+0100 TZNAME:CET DTSTART:20231029T010000 END:STANDARD BEGIN:DAYLIGHT TZOFFSETFROM:+0100 TZOFFSETTO:+0200 TZNAME:CEST DTSTART:20240331T010000 END:DAYLIGHT BEGIN:STANDARD TZOFFSETFROM:+0200 TZOFFSETTO:+0100 TZNAME:CET DTSTART:20241027T010000 END:STANDARD BEGIN:DAYLIGHT TZOFFSETFROM:+0100 TZOFFSETTO:+0200 TZNAME:CEST DTSTART:20250330T010000 END:DAYLIGHT BEGIN:STANDARD TZOFFSETFROM:+0200 TZOFFSETTO:+0100 TZNAME:CET DTSTART:20251026T010000 END:STANDARD END:VTIMEZONE BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231116T093000 DTEND;TZID=Europe/Stockholm:20231116T170000 DTSTAMP:20260404T090037 CREATED:20231004T141040Z LAST-MODIFIED:20231109T155333Z UID:10000989-1700127000-1700154000@www.scilifelab.se SUMMARY:New Horizons for Swedish Sciences: World-unique (Bio)Solids Capabilities at the national UMU NMR facility DESCRIPTION:Inauguration of world-unique combined solid-state NMR equipment (MAS CryoNMR Probe + Ultrafast MAS NMR Probe) for the next application level in sciences ranging from bio and medical sciences to novel material and environment. Equipment is installed at the Umeå University KBC NMR core facility\, a national SciLifeLab and VR-RFI (SwedNMR) node. \n\n\n\nRead more\n\n\n\nProgram \n\n\n\nProgramInaugurationNMR20231116finalDownload URL:https://www.scilifelab.se/event/new-horizons-for-swedish-sciences-world-unique-biosolids-capabilities-at-the-national-umu-nmr-facility/ LOCATION:Carl Kempe-salen\, KBC Building\, Umeå University\, Umeå\, Sweden CATEGORIES:Event ORGANIZER;CN="Swedish NMR Centre":MAILTO:info@nmr.gu.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231116T133000 DTEND;TZID=Europe/Stockholm:20231116T153000 DTSTAMP:20260404T090037 CREATED:20231017T130803Z LAST-MODIFIED:20231101T115949Z UID:10001003-1700141400-1700148600@www.scilifelab.se SUMMARY:Building and sharing machine learning demo applications within life sciences: a practical tutorial DESCRIPTION:This workshop is part of the DDLS Annual Conference 2023: The emerging role of AI in data-driven life science. This event is also part of Tools for AI/ML research in life sciences event series arranged by the SciLifeLab Data Centre. \n\n\n\nTitle: Building and sharing machine learning demo applications within life sciences: a practical tutorial \n\n\n\nOrganizer: AI Data Engineers from the SciLifeLab Serve team. \n\n\n\nWhere and when: November 16\, 2023 at 13:30-15:30 at SciLifeLab Solna (Tomtebodavägen 23A\, Solna) \n\n\n\nAbstract: It is becoming increasingly popular to share machine learning models with the community as web applications with an easy-to-use interface. Users can then adjust parameters or submit their own input and see the predictions generated by the underlying model. This tutorial is aimed at researchers working within life sciences who work with machine learning models but do not have the skills to build applications for web. During the tutorial we will start from a trained model and demonstrate step by step how you can create a graphical user interface for your application\, prepare it for deployment\, and make it available on the web with a URL. We will demonstrate the use of specific tools which make this process easy and doable in under an hour. \n\n\n\nThe workshop will last for 2 hours with a break in the middle. We have room to accept 30 participants\, on the first come first served basis. Those registered after that will be placed on the waiting list. \n\n\n\nSince there is a limited number of spots in this workshop please sign up only if you intend to attend. \n\n\n\nThis event is now full\, you can register for the waiting list only (in case we received a cancellation). We will organize similar workshops in the future\, it will be announced in the same event series. \n\n\n\nRegister to join the event\n\n\n\nMore about the event series: \n\n\n\nTools for AI/ML research in life sciences is an event series by the SciLifeLab Data Centre aimed at life science researchers who use machine learning methods in their work. The goal of the events in this series is to provide introductions to different tools for ML research but also to foster discussions around our practices and how they can be improved. The events takes place virtually (over Zoom) and are open to researchers in Sweden and beyond. Each event is scheduled for 60 minutes\, consisting of a talk and an extended discussion. Follow the page of the event series to learn about future seminars. \n\n\n\nFor questions about the events please contact the organizing team by emailing serve@scilifelab.se \n\n\n\n \n\n\n\nScientific lead: Prof. Ola Spjuth\, SciLifeLab Data Centre and Uppsala University \n\n\n\nContact information: serve@scilifelab.se URL:https://www.scilifelab.se/event/building-and-sharing-machine-learning-demo-applications-within-life-sciences-a-practical-tutorial/ LOCATION:SciLifeLab Campus Solna\, Tomtebodavägen 23 A\, Solna\, Sweden CATEGORIES:Event END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231117T090000 DTEND;TZID=Europe/Stockholm:20231117T141000 DTSTAMP:20260404T090037 CREATED:20230830T210018Z LAST-MODIFIED:20231112T090520Z UID:10000962-1700211600-1700230200@www.scilifelab.se SUMMARY:Cell and Molecular Biology Symposium DESCRIPTION:The DDLS research area\, Cell and molecular biology\, invites you to the first in-person symposium. The day will be an introduction to the research area Fellows and Expert Group. \n\n\n\nRegistration\n\n\n\nWe have a limited number of seats (52p). All participants must register (including the speakers i.e.\, DDLS Fellows and research area Expert group). Participant list here If you register after Nov 7\, we offer fika and lunch but can’t accommodate food preferences. \n\n\n\nRegistration\n\n\n\nAgenda\n\n\n\n08:45Registration\, check-in and Coffee09:00Introduction to Data-driven Life Science program and the Cell and molecular biology research areaMargit Mahlapuu\, Chair of the DDLS CMB Expert groupPresentations of fellows\, Expert group members\, and Data science node09:15Title TBAJuliette Griffie\, DDLS Fellow09:40Making it work in reality – bridging the gap between curated proof of concept tests and real world deployment of biomedical image based deep learningIda-Maria Sintorn\, DDLS Expert group 09:55AICell Lab: Towards AI-powered Data-driven Whole-cell ModelingWei Ouyang\, DDLS Fellow10:20Title TBAErik Lindahl\, DDLS Expert group10:35Coffee break 10:50Time-resolved structural studies of photoactive proteinsSebastian Westenhoff\, DDLS Expert group11:05From model systems to global surveillance programs for infectious diseases: Some challenges and the road aheadJohan Bengtsson-Palme\, DDLS Fellow11:30The DDLS Data Science Node – status report towards supporting the national CMB research communityThomas Svensson\, Sverker Holmgren\, Data Science node12:00RNA insights from extinct animals and single cellsMarc Friedländer\, DDLS Expert group12:15Understanding intestinal diseases with spatial transcriptomicEduardo Villablanca\, DDLS Expert group12:30Lunch13:15“Weak\, noisy and uninteresting”: subtle features of macromolecular structuresNicholas Pearce\, DDLS Fellow13:40Metabolic Liver Disease: Molecular Mechanisms and Novel TargetsMargit Mahlapuu\, DDLS Expert group13:55Wrap-up and Action item summaryMargit Mahlapuu14:10End of the day URL:https://www.scilifelab.se/event/cell-and-molecular-biology-symposium/ LOCATION:Biomedicum\, room Peter Reichard\, Solnavägen 9\, Stockholm\, 171 65 CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/03/CMB_Icon-1.png END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231121T150000 DTEND;TZID=Europe/Stockholm:20231121T160000 DTSTAMP:20260404T090037 CREATED:20220829T115023Z LAST-MODIFIED:20231120T151621Z UID:10000656-1700578800-1700582400@www.scilifelab.se SUMMARY:SciLifeLab Data Platform- how we support data-driven life science research DESCRIPTION:The SciLifeLab Data Management seminar series next event is focused on the SciLifeLab Data Platform which is a hub for data-driven life science research. The SciLifeLab Data Platform aims to act as a ‘one-stop shop’ for data-driven life science in Sweden. It includes services (e.g. tools and databases)\, materials related to community building (e.g. jobs and events pages)\, and resources aimed at promoting data-driven life science research (e.g. data highlights). Presentations from the Liane Hughes\, SciLifeLab Data Centre Platform team lead\, will give you an overview of about the services\, resources\, and community building of the Platform\, suggestions on how you can contribute\, as well as a quick guide to hosting your data on the Platform.  \n\n\n\nWhen: Nov 21\, 3.00-4.00 PM CET.Where: Zoom \n\n\n\nRegister before Nov 21 at 3PM ( Zoom link will be sent out to registered participants.) \n\n\n\n\nRegister\n\n\n\n\nSciLifeLab Data Management seminar series is an event series by the SciLifeLab Data Centre and NBIS joint Data Management team aimed at both the life science research community and infrastructure\, and others with an interest in research data management in life sciences. The events will showcase how to put the FAIR principles\, and good data management into practice. The goal of the events in this seminar series is to provide interesting seminars around topics related to research data management in general but also to foster discussions around best practices and how they can be improved. The events takes place virtually (over Zoom) and are open to everyone\, (researchers\, staff\, RDM professionals etc.) working at or affiliated with a Swedish research institute or university. Each event is scheduled for 60 minutes\, consisting of a presentation and an also gives time to discussion and questions from the participants. The videos will be published openly after the seminars at the SciLifeLab YouTube channel. \n\n\n\nMore information about  SciLifeLab Data Centre and NBIS joint Data Management team: https://data-guidelines.scilifelab.se/ \n\n\n\nWelcome! \n\n\n\nOrganisers: SciLifeLab Data Centre and NBIS National Bioinformatics Infrastructure Sweden \n\n\n\nContact us\, data-management@scilifelab.se URL:https://www.scilifelab.se/event/data-platform-how-we-support-data-driven-life-science/ CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/05/prickar-1-edited-1.png LOCATION:https://www.scilifelab.se/event/data-platform-how-we-support-data-driven-life-science/ END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231122T100000 DTEND;TZID=Europe/Stockholm:20231122T120000 DTSTAMP:20260404T090037 CREATED:20230921T093726Z LAST-MODIFIED:20231120T152126Z UID:10000974-1700647200-1700654400@www.scilifelab.se SUMMARY:Data Management Plans in practise - research funder perspectives and practical demos DESCRIPTION:Join SciLifeLab Data Centre and NBIS in collaboration with Uppsala University Library and Umeå University Library for a joint virtual event “Data Management Plans in practise – research funder perspectives and practical demos“. The first hour is focused on Data Management Plans (DMPs) from the perspective of Swedish research funders. \n\n\n\nPart 1 – Data Management Plans (DMPs) from the perspective of Swedish research fundersToday\, many research funders require or recommend that researchers write DMPs for the research projects that they fund. What is the purpose of DMPs from the research funder´ s perspective? What would the funder like to achieve with the DMPs? Major Swedish research funders present their perspective as stakeholders\, followed by a panel discussion about how DMPs can help researchers and funders conduct research more effectively and to improve the quality of the research outputs. \n\n\n\nPart 2 – Demonstration of DMPonline and Data Stewardship WizardMany researchers and PhD students perceive writing a DMPs as a difficult task. A common mistake that researchers make when they write their first DMPs is copying content from their research plan. This is usually not going to work well because data management plans address different questions than research plans. A data management plan is not about scientific questions but about work with information and how this information can be preserved and shared with other stake holders. This webinar offers interested participants an opportunity to see how tools for writing DMPs look like\, what guidance they give and how one can use question-based templates to write a data management plan in a short time. The demonstrations cover the tools DMPonline and Data Stewardship Wizard. DMPonline is a general tool that researchers can use to write DMPs or all disciplines. Data Stewardship Wizard has a different design and SciLifeLab offers an instance focused on research in life sciences. \n\n\n\nWhen: Nov 22nd 2023. 10.00-12.00 (Stockholm time) on Zoom \n\n\n\nTarget group: Researchers and PhD students from all research fields and everybody else who works with research data. \n\n\n\nRegister by Nov 22\, at 10.00 \n\n\n\n\nRegister\n\n\n\n\n \n\n\n\nPart 1: Data Management Plans – the perspective of Swedish research funders \n\n\n\n10:00 – 10:05 Welcome\, Christer Lagvik\, Uppsala University Library \n\n\n\n10:05 – 10:35 Presentations from Sanja Halling\, Swedish Research Council\, Eva Stensköld\, Riksbankens Jubileumsfond and Andreas Björke\, Forte. \n\n\n\n10:35 – 10:55 Panel discussion Sanja Halling\, Swedish Research Council\, Eva Stensköld\, Riksbankens Jubileumsfond\, Andreas Björke\, Forte and Siv Andersson\, Knut and Alice Wallenberg Foundation. Moderator: Niclas Jareborg\, NBIS \n\n\n\nPart 2. Demos of tools for writing DMPs \n\n\n\n11:05 – 11:35 Demonstration of DMPonline using a question-based template\, Theresa Kieselbach\, Umeå University Library. \n\n\n\n11:35 – 12:00 Demonstration of Data Stewardship Wizard at SciLifeLab\, Elin Kronanser\, NBIS. \n\n\n\nWelcome! \n\n\n\nThis event is a collaboration between SciLifeLab Data Centre\, NBIS\, Uppsala University Library and Umeå University Library. For questions please contact SciLifeLab Data Centre datacentre@scilifelab.se URL:https://www.scilifelab.se/event/data-management-plans-in-practise/ CATEGORIES:Event LOCATION: END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231122T141500 DTEND;TZID=Europe/Stockholm:20231122T150000 DTSTAMP:20260404T090037 CREATED:20231115T101836Z LAST-MODIFIED:20231115T150503Z UID:10001028-1700662500-1700665200@www.scilifelab.se SUMMARY:Launch of calls for DDLS PhD projects DESCRIPTION:The SciLifeLab & Wallenberg National Program for Data-Driven Life Science announces calls for PhD projects within academia and industry. The calls will be open for researchers in Sweden who are interested to act as supervisor for a PhD student. The aim is to fund 20 projects for academic PhD students and 7 for industrial. Join this online event for detailed information about the calls and the possibility to ask questions. \n\n\n\nAGENDA \n\n\n\nInformation about calls – Olli Kallioniemi\, DDLS director \n\n\n\nQ & A session \n\n\n\n\nRegister here\n\n\n\n\nWebpage: https://www.scilifelab.se/data-driven/ddls-research-school/ URL:https://www.scilifelab.se/event/call-for-ddls-phd-projects/ LOCATION:Online event via Zoom CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/11/Academy_call.png END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231122T150000 DTEND;TZID=Europe/Stockholm:20231122T160000 DTSTAMP:20260404T090037 CREATED:20231107T071615Z LAST-MODIFIED:20231115T100612Z UID:10001019-1700665200-1700668800@www.scilifelab.se SUMMARY:BAM-seminar; From PhD-student to patent attorney at Potter Clarkson DESCRIPTION:The PhD and PostDoc council is excited to host Dr. Tomasz Wirt\, who currently serves as a trainee patent lawyer at Potter Clarkson\, a European law firm specialised in intellectual property. \n\n\n\nTomasz pursued his doctoral studies at Stockholm University and is a SciLifeLab Campus Solna alumni. He will offer valuable insights into his career journey and provide an in-depth look at his current role as a patent lawyer. \n\n\n\n\n\n\n\nThis seminar is tailored specifically to address the unique challenges faced by PhD students and PostDocs in navigating a transition to jobs in industry. Join us as we highlight real-life success stories and provide valuable insights into professions outside academia. \n\n\n\nEveryone welcome! Fika for registered participants. Register by November 19th! \n\n\n\n\n\n\n\n\n\n\n\nRegister URL:https://www.scilifelab.se/event/bam-seminar-from-phd-student-to-patent-attorney-at-potter-clarkson/ LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/11/BAM-seminar.png ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231124T100000 DTEND;TZID=Europe/Stockholm:20231124T160000 DTSTAMP:20260404T090037 CREATED:20231019T124448Z LAST-MODIFIED:20231122T105255Z UID:10001004-1700820000-1700841600@www.scilifelab.se SUMMARY:SciLifeLab Bioinformatics Platform NBIS celebrates 15 years DESCRIPTION:NBIS celebrates 15 years and organises an Anniversary Symposium on Friday 24 November at 10:00 – 16:00 with mingle afterwards in Uppsala\, SciLifeLab Trippelrummet.On the agenda so far:KeynotesPresentation of Human Protein Atlas (HPA) by Mathias UhlénPresentation of Bigpicture by Jeroen van der LaakUser presentations2–3 user presentations (users of the national bioinformatics infrastructure NBIS)NBIS presentationsPresentation of NBIS 15 years and ELIXIR 10 years by Bengt PerssonPresentation of WABI 10 years by Björn NystedtHuman data — 1+MG och GDI (Anna Hagwall/Johan Viklund)Presentation of our Training activities by Jessica LindvallPresentation of computational support by Jonas SöderbergData management – enable FAIR data for Swedish research (Niclas Jareborg)Mingle afterwards with drinks and finger food.Preliminary programme and link to registration available \n\n\n\nRead more URL:https://www.scilifelab.se/event/scilifelab-bioinformatics-platform-nbis-celebrates-15-years/ LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/10/nbis-eventlogo-nb.png ORGANIZER;CN="NBIS - National Bioinformatics Infrastructure Sweden":MAILTO:education@nbis.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231127T151500 DTEND;TZID=Europe/Stockholm:20231127T161500 DTSTAMP:20260404T090037 CREATED:20231113T153444Z LAST-MODIFIED:20231113T153447Z UID:10001029-1701098100-1701101700@www.scilifelab.se SUMMARY:[The Svedberg seminar] - Brain-wide hierarchical and multiplexed encoding of behaviour in C. elegans DESCRIPTION:Manuel Zimmer \n\n\n\nProfessor Department of Neuroscience and Developmental Biology\, The University of Vienna \n\n\n\n \n\n\n\n\n\n\n\nBio\n\n\n\n\n\n\n\nManuel Zimmer studied biochemistry at the Free University of Berlin and performed his undergraduate thesis in 1998 on neuromuscular synapse formation with Steve Burden at the Skirball Institute of Biomolecular Medicine\, New York University Medical School\, New York. Afterward\, he moved back to Germany to perform his Ph.D. work with Rüdiger Klein at the European Molecular Biology Laboratory in Heidelberg and the Max Planck Institute of Neurobiology in Munich\, until 2003. Here\, he focused on the molecular mechanisms that wire up the nervous system during development. From 2004 to 2010\, he performed his postdoctoral studies with Cori Bargmann at the University of California\, San Francisco\, and Rockefeller University\, New York. Here\, he developed lab-on-a-chip and calcium-imaging techniques to investigate the chemosensory mechanisms by which animals sense oxygen in the environment. Since 2010\, he has lived in Austria\, where he works as an independent group leader at the Research Institute of Molecular Pathology in Vienna. Dr. Zimmer’s current research is focused on how neuronal network dynamics in the brain of C. elegans arise from sleep to wakefulness to engage in processing the sensory world and to produce competent behaviors\, like foraging and navigation. \n\n\n\n \n\n\n\nBrain-wide hierarchical and multiplexed encoding of behaviour in C. elegans\n\n\n\nLarge-scale neuronal recordings in the brains of different species have revealed brain-wide\, highly coordinated patterns of neuronal activity associated with the animals’ ongoing behaviours. It is not known why behaviour is represented in the brain on such a global scale. In the nematode C. elegans\, the activity of such neuronal populations recorded from immobilised animals was suggested to correlate with brain-wide motor commands orchestrating a major action sequence. Direct confirmation of this conclusion in freely crawling animals has been lacking. I will present unpublished data from a new imaging pipeline to record brain-wide activity at single cell resolution in freely crawling animals performing a variety of motor behaviours.Extending our previous findings\, we observe population-wide neural activity in the form of a structured low-dimensional manifold from which the major motor programmes\, arranged as an action sequence\, can be decoded. However\, the brain-wide activity appears to be much richer than just encoding the identity of the main actions: while all behaviourally relevant neuronal activity patterns we detect in our recordings are modulated by the global population modes\, many individual neurons show multiplexed activity\, i.e. they carry additional residual signals. These can represent a variety of behaviourally relevant information\, such as graded movement metrics\, the animal’s undulatory gate\, or even re-afferent sensation of movement-triggered external signals.In summary\, we discover a brain-wide hierarchical organisation of behaviour in which information about the current slow time-scale behavioural state is broadcast across the brain via a low-dimensional population mode\, providing a context for the encoding of fine-tuned fast movement patterns and even sensory perception. We propose this as an organising principle that may apply to animals with larger brains. \n\n\n\nhttps://neurodevbio.univie.ac.at/zimmer-research/ \n\n\n\n\n\n\n\nHost: Klas Kullander\, UU URL:https://www.scilifelab.se/event/the-svedberg-seminar-manuel-zimmer/ LOCATION:BMC Room C8:301\, Husargatan 3\, Uppsala\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/02/Picture1-The-Svedberg.png ORGANIZER;CN="The Svedberg Seminar Series":MAILTO:thesvedberg@scilifelab.uu.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231129T080000 DTEND;TZID=Europe/Stockholm:20231201T170000 DTSTAMP:20260404T090037 CREATED:20230413T132104Z LAST-MODIFIED:20230508T131425Z UID:10000858-1701244800-1701450000@www.scilifelab.se SUMMARY:Correlated Array Tomography Workshop DESCRIPTION:Array Tomography workflow: Fixation of the specimen and embedding in a suitable matrix; Serial sectioning of the specimen\, and collection of the sections to create a ribbon; Staining of the sections; Sections are identified and imaged at low resolution to find ROIs\, which are later imaged at high-resolution to create a 3D view of the specimen.\n\n\n\n \n\n\n\nThe Centre for Cellular Imaging\, which is the national SciLifeLab facility for Correlative Array Tomography in Sweden\, has the great pleasure to welcome you to the first Cellular 3D volume – Correlative Array Tomography (CAT) Workshop! The workshop will take place from November 29th to December 1st. The lectures will take place at the Wallenberg Centre\, located at Medicinareberget\, above the Sahlgrenska Hospital in Gothenburg. The hands-on sessions will take place in the Centre for Cellular Imaging\, Core Facilities\, at Medicinareberget. \n\n\n\nIt is a great pleasure to welcome you to first Cellular 3D volume – Correlative Array Tomography (CAT) Workshop 2023 – Centre for Cellular Imaging the National SciLifeLab Facility in Correlative Array Tomography in Sweden \n\n\n\nMany biological functions depend critically upon fine details of tissue molecular architecture that have resisted exploration by existing imaging techniques. Array tomography encompasses light and electron microscopy modalities that offer unparalleled opportunities to explore three-dimensional cellular architectures of large samples in extremely fine structural and molecular detail\, including neural circuits\, organs (e.g. brain\, pancreas\, kidney\, heart)\, small model organisms and subcellular organelle networks. Based on methods for constructing and repeatedly staining and imaging ordered arrays of ultrathin resin-embedded serial sections on glass slides\, silicon wafers or tapes\, array tomography allows for quantitative\, high-resolution\, large-field volumetric imaging of large numbers of antigens\, fluorescent proteins\, and ultrastructure in individual tissue specimens. This will contribute further to the understanding of the complex 3D architecture of tissues in their natural context\, which is crucial for gaining understanding of the structure function correlation in biological systems\, and especially to resolve questions not possible to dissect with conventional scanning or transmission electron microscopy techniques. \n\n\n\nThe CAT 2023 Workshop is designed to bring experts\, researchers and industry together interested in Cellular 3D volume – Correlative Array Tomography to introduce this new technology\, stimulate knowledge exchange and the formation of collaborations. No matter where you are in your career\, participating at this Workshop will allow you to stay abreast of this new imaging technology\, learn new sample preparation and image analysis methods\, and most importantly\, network with colleagues and make new connections.  \n\n\n\nThe program will offer an attractive combination of lectures and hands-on demonstrations from electron and light microscopy to image analysis. It will also provide excellent opportunities for discussions and informal gatherings. The sessions will cover the following topics within cellular 3D volume-array tomography research: Volume electron/light microscopy-array tomography; Sample preparation for Array Tomography; Image processing and analysis for Array Tomography; Correlative array tomography; Multibeam scanning electron microscopy. Take the opportunity to challenge your brain and create a new network!  \n\n\n\nJulia Fernandez-Rodriguez \n\n\n\nChair of the Cellular 3D volume – Correlative Array Tomography Workshop \n\n\n\nread more\n\n\n\nregistration\n\n\n\nCLEM example: Correlative light and electron microscopy to identify cells of interest in skin equivalent. The image represents only a small example of the CAT dataset. URL:https://www.scilifelab.se/event/correlated-array-tomography-workshop/ LOCATION:Centre for Cellular Imaging\, Medicinaregatan 7A\, Göteborg CATEGORIES:Event END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231130T100000 DTEND;TZID=Europe/Stockholm:20231130T113000 DTSTAMP:20260404T090037 CREATED:20231116T081613Z LAST-MODIFIED:20231129T160528Z UID:10001030-1701338400-1701343800@www.scilifelab.se SUMMARY:SciLifeLab FAIR storage - how to apply for storage resources DESCRIPTION:SAVE THE DATE \n\n\n\nIn order to support data-driven life science research\, SciLifeLab offers storage resources for data sharing in accordance with the FAIR principles for projects that advance scientific knowledge and discovery within the field of Swedish data-driven life science. SciLifeLab Data Centre is responsible for allocating these resources and for the application process. The applications to use FAIRstorage is now open through the Swedish User and Project Repository (SUPR) Portal (call open Nov 16 -Dec 31). Following the recent launch of FAIRstorage\, this is an event where the FAIRstorage applications process\, along with Research Data Management resources needed for the application\, will be presented. The target group for this call is researchers\, research groups\, and organisations. \n\n\n\nAdhering to Open Science and FAIR principles the applicants will be required to submit a Data Management Plan (DMP) already at the time of application and should be actively maintained\, as DMP is a living document\, during the project. Awarded applicants are also expected to openly publish data output from the project. SciLifeLab Data Centre and NBIS are offering a support event where the FAIRstorage applications process\, along with Research Data Management resources needed for the application\, will be presented. \n\n\n\nWhen: Nov 30\, 10-11.30 AM \n\n\n\nWhere: Virtual event on Zoom \n\n\n\nRegister: before Nov 30\, at 9 AM \n\n\n\n10.00-10.20 Introduction to FAIRstorage and an overview of processes for applying for FAIRstorage using SUPR\, Jonas Svensson\, IT manager\, and Elisabeth Sundström\, Project leader\, SciLifeLab Data Centre \n\n\n\n10.20-10.50 Data Stewardship Wizard-a DMP tool- as a resource for your SUPR application\, Wolmar Nyberg Åkerström\, Data steward\, NBIS \n\n\n\n10.50-11.00  SciLifeLab Data Repository- publishing your data- as a resource for your SUPR application\, Angela Fuentes Pardo\, Data steward\, SciLifeLab Data Centre \n\n\n\n11.00-11.30 Q & A \n\n\n\n \n\n\n\n\nRegister \n\n\n\n\nThis is an event in the SciLifeLab Data Centre and NBIS  SciLifeLab Data Management seminar series.  \n\n\n\nLearn more about FAIRstorage and the call here: https://data.scilifelab.se/services/fairstorage/ \n\n\n\nMail: FAIRstorage@scilifelab.se Contact the SciLifeLab Data Centre and NBIS joint Data Management support team data-management@scilifelab.se URL:https://www.scilifelab.se/event/fairstorage/ CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/11/Skarmavbild-2023-11-16-kl.-09.23.09.png LOCATION: END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231204T080000 DTEND;TZID=Europe/Stockholm:20231204T170000 DTSTAMP:20260404T090037 CREATED:20231205T091920Z LAST-MODIFIED:20231206T095226Z UID:10001059-1701676800-1701709200@www.scilifelab.se SUMMARY:SciLifeLab workshop on dynamical microscopy DESCRIPTION:Welcome to a SciLifeLab workshop on dynamical microscopy covering modalities AIRY\, lattice lightsheet and FCS/DP\, including quality control and image analysis. \n\n\n\nAgenda \n\n\n\n12:00 Introduction – Hans Blom\, ALM/SciLifeLab \n\n\n\n12:05 AIRY scan imaging – Eric Murén ZEISS & Hjalmar Brismar\, ALM/SciLifeLab \n\n\n\n12:35 Quality Control  – Chris Lagerholm\, Turku Bioimaging Center \n\n\n\n13:05 Lattice light-sheet imaging – Steven Edwards\, ALM/SciLifeLab & Jan Schlegel Karolinska Institutet \n\n\n\n13:35 Coffee break \n\n\n\n13:50 Dynamical analysis with FCS – Stefan Wennmalm\, ALM/SciLifeLab \n\n\n\n14:15 Multiplexed dynamical analysis with DP – Maria Trulsson ZEISS \n\n\n\n14:40 Advanced image analysis support – Molly McQuilken\, ZEISS arivis \n\n\n\n15:20 – 16:20   3x Demo sessions (project discussions) \n\n\n\nFast AIRY scan microscopy & FCS/DP; Lattice light-sheet imaging; Image analysis support \n\n\n\nRegistration: hans.blom@scilifelab.se URL:https://www.scilifelab.se/event/scilifelab-workshop-on-dynamical-microscopy/ LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/12/March-6th.png ORGANIZER;CN="Advanced Light Microscopy Unit":MAILTO:stewen@kth.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231204T151500 DTEND;TZID=Europe/Stockholm:20231204T161500 DTSTAMP:20260404T090037 CREATED:20231123T132908Z LAST-MODIFIED:20231124T082227Z UID:10001037-1701702900-1701706500@www.scilifelab.se SUMMARY:[The Svedberg seminar] - Intersecting population genetics\, stem cell biology\, and cellular genomics to study complex human disease DESCRIPTION:Joseph Powell \n\n\n\nProfessor Garvan Institute of Medical Research\, Sydney Australia \n\n\n\n \n\n\n\n\n\n\n\nBio\n\n\n\nProfessor Powell is the Director of Translational Genomics at the Garvan Institute and Director of the UNSW Cellular Genomics Futures Institute. He received his PhD from the University of Edinburgh. Subsequently\, he undertook postdoctoral training with Professor Peter Visscher’s FAA FRS and started his lab in 2016. In 2018\, he was recruited as the inaugural Director of the Garvan-Weizmann Centre for Cellular Genomics and developed a multidisciplinary program in translational genomics research. \n\n\n\n\n\n\n\nAbstract: Genetic variants can contribute to disease in many ways. In complex diseases\, hundreds to thousands of variants independently contribute to disease risk\, and an accumulation of risk alleles – often combined with specific environmental exposures –is required to develop the disease phenotype. The overwhelming evidence showing enrichment of disease-associated variants in regulatory regions suggests that regulation of gene expression is likely a dominant mediator for disease risk. Expression quantitative trait loci (eQTL) analysis links disease risk-SNPs to downstream expression effects. An essential next step is defining the cellular contexts in which disease risk-SNPs affect gene expression levels. This will help better understand the molecular and cellular mechanisms by which disease risk is conferred and inform therapeutic strategies. This talk will cover a body of work on how single-cell sequencing technology can be scaled to enable the type of population genetics studies required to address these biological questions. I will present recent research on how we have resolved how genetic variation acts at the level of individual cells in immune cell and stem cell systems and outline the next steps in translating these findings into clinical impact. \n\n\n\n \n\n\n\n\n\n\n\nHost: Weronica Ek\, UU URL:https://www.scilifelab.se/event/the-svedberg-seminar-joseph-powell/ LOCATION:BMC Room C8:301\, Husargatan 3\, Uppsala\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/02/Picture1-The-Svedberg.png ORGANIZER;CN="The Svedberg Seminar Series":MAILTO:thesvedberg@scilifelab.uu.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231206T090000 DTEND;TZID=Europe/Stockholm:20231206T160000 DTSTAMP:20260404T090037 CREATED:20231025T125024Z LAST-MODIFIED:20231124T132106Z UID:10001008-1701853200-1701878400@www.scilifelab.se SUMMARY:Integrated Structural Biology users meeting DESCRIPTION:We invite Structural Biologists in Sweden to participate in 2023 Integrated Structural Biology Users meeting\, held in Solna on Dec 6\, 9-16\, see program below.  \n\n\n\nPlease register before November 30 \n\n\n\nregistration\n\n\n\nAll PhD students and post docs within areas such as Cryo-EM\, Structural Proteomics\, NMR\, protein production and other relevant areas are welcome and encouraged to send an abstract and be provided a time slot for a flash talk. If traveling to Solna is needed\, we will pay for travel and one hotel night (December 5). If more applicants than time slots\, we will distribute nationally and from different areas. \n\n\n\nProgram\n\n\n\nISB-User-MeetingDownload URL:https://www.scilifelab.se/event/isb-users-meeting/ LOCATION:Wangari\, Widerströmska building\,\, Tomtebodavägen 18\, Solna\, Sweden CATEGORIES:Event ORGANIZER;CN="Integrated Structural Biology Platform at SciLifeLab":MAILTO:cecilia.persson@nmr.gu.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231206T100000 DTEND;TZID=Europe/Stockholm:20231206T130000 DTSTAMP:20260404T090037 CREATED:20231120T114459Z LAST-MODIFIED:20231120T114502Z UID:10001036-1701856800-1701867600@www.scilifelab.se SUMMARY:Introducing Molecular Pixelation - Spatial proteomics of single cells by Next Generation Sequencing DESCRIPTION:We are pleased to invite you to our Spatial Proteomics Seminar organized together with SNP&SEQ Technology Platform/National Genomics Infrastructure (NGI). We will take you beyond the use of flow cytometry and focal microscopy into the intriguing and dynamic world of the cell-surface proteome of single cells through next-generation sequencing. \n\n\n\nFollowing the seminar\, we will serve sandwiches and refreshments. \n\n\n\nDate: Wednesday\, December 6\, 2023Time: 10:00 to 13:00 CETLocation: SciLifeLab Uppsala (Navet)Uppsala Biomedicinska CentrumHusargatan 3\, entrance C11\,752 37 Uppsala \n\n\n\nMolecular Pixelation\n\n\n\nBy simultaneously analyzing changes in the dynamic protein architecture of cellmembranes across 1000s of single cells\, a new chapter has unfolded. This allows us toassess how subtle alterations in the spatial orchestration of proteins impact the immunesystem\, disease outcomes\, and responses to treatment. \n\n\n\nAgenda\n\n\n\n10:00 – 10:05 WelcomeAnnaLotta Schiller\, Pixelgen10:05 – 10:35 Introducing Molecular PixelationSimon Fredriksson\, Pixelgen10:35 – 10:55 Mapping individual drug responses using Molecular PixelationJessica Nordlund\, SciLifeLab\, NGI\, UU10:55 – 11:05 Sequencing single cells at the SciLifeLab National Genomics InfrastructureHenrik Gezelius\, SciLifeLab\, NGI\, UU11:05 – 11:35 Panel discussion including Q&ASimon\, Jessica & Henrik11:35 – 13.00 Sandwiches & Cake \n\n\n\nThe seminar will be accessible in both in-person and virtual formats \n\n\n\nReserve Your Spot\n\n\n\nTo secure your place for the lunch seminar\, register on the link below\, specifying your attendance and lunch preferences. All participants must register including the speakers as well as both in person and virtual attendees \n\n\n\nRegister here URL:https://www.scilifelab.se/event/introducing-molecular-pixelation-spatial-proteomics-of-single-cells-by-next-generation-sequencing/ LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden CATEGORIES:Event ORGANIZER;CN="National Genomics Infrastructure (NGI)":MAILTO:support@ngisweden.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231206T140000 DTEND;TZID=Europe/Stockholm:20231206T163000 DTSTAMP:20260404T090037 CREATED:20231011T092741Z LAST-MODIFIED:20231129T101253Z UID:10000998-1701871200-1701880200@www.scilifelab.se SUMMARY:Joined DanioReadout\, Local SciLifeLab Service Facility and CIV Zebrafish Core Facility information meeting DESCRIPTION:Zebrafish model focused afternoon with useful information on newly opened\, cutting-edge Uppsala University Zebrafish Core Facility (CIV) and DanioReadout Service Facility (Local SciLifeLab Facility)\, dedicated for researchers interested in zebrafish model and its applications \n\n\n\n\n\n\n\nHost: Aristidis Moustakas (SciLifeLab Scientific Director\, Uppsala University) \n\n\n\nOrganizer: Beata Filipek-Gorniok (DanioReadout Operational Director) \n\n\n\nContact: danioreadout@uu.se \n\n\n\n\n\n\n\nProgram\n\n\n\n14:00WelcomeAristidis Moustakas\, SciLifeLab-Uppsala Scientific Director14:15OpeningKaska Koltowska\, DanioReadout Scientific Director\, and Joakim Holmdal\,CIV Director14:30Zebrafish Core FacilityTiffany Klingström\, zebrafish facility manager14:40Inspirational talk15:10Coffee Break15:30DanioReadout service facilityBeata Filipek-Gorniok and Amin Allalou15:50How do I utilize zebrafish model in my project?short presentations by zebrafish researchers16:30Wrap up\n\n\n\n \n\n\n\n\n\n\n\n\n\nRegistration\n\n\n\nDeadline 2023-11-30 \n\n\n\n\n\nMore about DanioReadout services URL:https://www.scilifelab.se/event/joined-danioreadout-local-scilifelab-servicefacility-and-civ-zebrafish-core-facility-information-meeting/ LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/10/Zebrafish.png ORGANIZER;CN="DanioReadout%2C local SciLifeLab Service Facility at Uppsala University":MAILTO:danioreadout@uu.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231207T131500 DTEND;TZID=Europe/Stockholm:20231207T140000 DTSTAMP:20260404T090037 CREATED:20231204T135638Z LAST-MODIFIED:20231204T135723Z UID:10001058-1701954900-1701957600@www.scilifelab.se SUMMARY:Multi Omics Data Integration - A translational perspective DESCRIPTION:The forefront of deriving valuable insights into cellular functions involves the analysis of multi-omics data along with clinical  information. The integration of multi-omics data\, which encompasses information from diverse biomolecular layers\, holds promise for systematically and comprehensively understanding complex biology. Integrated approaches involve combining individual omics data either sequentially or simultaneously\, offering a means to explore the intricate interplay of molecules. This method proves valuable in assessing the flow of information across omics levels\, thereby bridging the gap from genotype to phenotype. Integrative approaches\, through their holistic examination of biological phenomena\, have the potential to enhance prognostic and predictive accuracy for disease phenotypes. Consequently\, they stand to contribute significantly to improved treatment and prevention strategies. In this talk I will show multiple approaches to integrate diverse data types and how we can use them in a translational medicine. \n\n\n\njoin zoom meeting\n\n\n\nAnimesh Acharjee\, PhDAssistant Professor\, Institute of Cancer and Genomic Sciences\, University of Birmingham\, United Kingdom \n\n\n\nBiography \n\n\n\n\n\n\n\nDr. Acharjee’s research interests encompass integrative data analytics\, predictive biomarker discovery\, bioinformatics methods for diagnostics\, and network biology. His multidisciplinary approach reflects his commitment to bridging the gap between computational methodologies and biological insights. Throughout his illustrious career\, Dr. Acharjee has been recognized with numerous fellowships\, including those from the British Council\, the Dutch Government\, and Newton fellowships. These accolades underscore his dedication to advancing scientific knowledge and his contributions to the fields of bioinformatics\, data analytics\, and biostatistics. Dr. Acharjee’s journey continues to be marked by a relentless pursuit of excellence in research and a commitment to unraveling the intricacies of metabolicdiseases through innovative methodologies. URL:https://www.scilifelab.se/event/multi-omics-data-integration-a-translational-perspective/ LOCATION:Online event via Zoom CATEGORIES:Event ORGANIZER;CN="NBIS - National Bioinformatics Infrastructure Sweden":MAILTO:education@nbis.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231208T151500 DTEND;TZID=Europe/Stockholm:20231208T161500 DTSTAMP:20260404T090037 CREATED:20231124T084624Z LAST-MODIFIED:20231124T084626Z UID:10001040-1702048500-1702052100@www.scilifelab.se SUMMARY:[The Svedberg seminar] - Engineered Salmonella for drug delivery to solid tumors DESCRIPTION:Neil Forbes \n\n\n\nProfessor of Chemical EngineeringUniversity of Massachusetts\, USA \n\n\n\n \n\n\n\n\n\n\n\nBio\n\n\n\nNeil Forbes is a Professor of Chemical Engineering at the University of Massachusetts\, Amherst. He is an adjunct member of the Molecular and Cell Biology Program and a member of the Institute for Applied Life Sciences. He received a BS in Chemical Engineering from Case Western Reserve University\, received a PhD in Chemical Engineering from the University of California at Berkeley (with Harvey Blanch and Douglas Clark)\, and was a postdoctoral fellow (with Rakesh Jain) in Radiation Oncology at Harvard Medical School / Massachusetts General Hospital. \n\n\n\nEngineered Salmonella for drug delivery to solid tumors\n\n\n\nAbstract: Engineered bacteria have the potential to overcome the limitations that cause cancer therapies to fail. We have created intracellular delivering Salmonella that accumulate in tumors over healthy tissue and deposit deliver therapeutic payloads directly into the cytoplasm of cancer cells. Bacterial delivery of constitutively active caspase-3 blocks the growth of hepatocellular carcinoma and lung metastases\, and increases survival in mice. Salmonella delivery of an exogenous antigen\, such as from a childhood vaccine\, marks cancer cells as foreign\, and triggers a cytotoxic\, antigen-specific CD8 T cell responses. In mice\, intracellular antigen delivery clears established pancreatic tumors\, increases survival\, and prevents tumor re-implantation by establishing new immunity to intrinsic tumor antigens. This tunable platform could deliver an array of protein drugs to target many hard-to-treat intracellular pathways. As an off-the-shelf therapy\, these bacteria are not dependent on intrinsic tumor characteristics and would be effective for a broad range of cancer patients. \n\n\n\n \n\n\n\n\n\n\n\nHost: Mia Phillipson mia.phillipson@mcb.uu.se\, UU URL:https://www.scilifelab.se/event/the-svedberg-seminar-neil-forbes/ LOCATION:BMC Room C4:301\, Husargatan 3\, entrance C1\, Uppsala\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/02/Picture1-The-Svedberg.png ORGANIZER;CN="The Svedberg Seminar Series":MAILTO:thesvedberg@scilifelab.uu.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231211T113000 DTEND;TZID=Europe/Stockholm:20231211T140000 DTSTAMP:20260404T090037 CREATED:20231102T140108Z LAST-MODIFIED:20231128T134645Z UID:10001017-1702294200-1702303200@www.scilifelab.se SUMMARY:Re-Imaging and Re-Imagining Science DESCRIPTION:As part of the 10th anniversary celebration of the Science & SciLifeLab Prize for young researchers\, we have got the honour to host a lunch seminar with Shirley Malcom who is senior advisor and director of SEA Change at the American Association for the Advancement of Science (AAAS). For more than 40 years at AAAS she has worked to improve the quality and increase access to education and careers in STEMM for all. \n\n\n\nFor the SciLifeLab audience\, Shirley will not only give an inspiring lecture. She will also take part of a panel discussion and attend an open discussion/networking session. \n\n\n\nDo not miss out on this opportunity! \n\n\n\nQuestions to be discussed; \n\n\n\n\nHow we can look critically at what is being done and not being done regarding inclusion?\n\n\n\nHow do we support excellence and what do we want research to look like?\n\n\n\nWhat kind of engagement do we want?\n\n\n\nHow do we bring assets into science and take advantage of people’s differences?\n\n\n\n\n\n\n\n\nRegister\n\n\n\nProgram\n\n\n\n11.30Lunch is served11.55Welcome\, Ylva Engström\, president SciLifeLab board12.00Re-Imaging and Re-Imagining Science\, Shirley Malcom AAAS12.30Panel discussion with Shirley Malcom\, DEI-committe\, Public Engagement\, Code of Conduct and Coaching in Science Initiativechair: Erdinc Sezgin13.05Concluding remarks\, Per Ljungdahl\, director Campus Solna SciLifeLab13.15Coffee\, Exhibition and Open Discussion in Gamma 2 lunchroom\n\n\n\nRead more\n\n\n\nShirley Malcom biography\n\n\n\nSEA Change \n\n\n\nCoaching in Science Initiative \n\n\n\nSciLifeLab Code of Conduct URL:https://www.scilifelab.se/event/shirley-malcom-lunch-seminar/ LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/10/Thumbnail-.png ORGANIZER;CN="Science/AAAS and SciLifeLab":MAILTO:events@scilifelab.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231212T090000 DTEND;TZID=Europe/Stockholm:20231212T133000 DTSTAMP:20260404T090037 CREATED:20231005T101319Z LAST-MODIFIED:20241115T085813Z UID:10000977-1702371600-1702387800@www.scilifelab.se SUMMARY:Science & SciLifeLab Prize Symposium 2023 DESCRIPTION:Welcome to the Scientific Symposium presenting the winners of the 2023 Science & SciLifeLab Prize for Young Scientists. \n\n\n\n\nN.b. This page concerns the Science & SciLifeLab Prize Symposium 2023. To learn about the 2024 event – please click the button below. \n\n\n\nRead about the science & SciLifeLab Prize symposium 2024\n\n\n\n\nScience\, the American Association for the Advancement of Science (AAAS)\, and SciLifeLab joined forces in 2013\, creating the Science & SciLifeLab Prize for Young Scientists to recognize excellence amongst young researchers from around the world. A global Prize aimed at rewarding scientists at an early stage of their careers\, this year celebrating its 10th anniversary. \n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n \n\n\n\nThe Science & SciLifeLab Prize for Young Scientists is an international prize\, awarded annually to four young scientists for outstanding life science research based on a doctoral degree earned in the previous two years.The grand prize-winning essay will be published in Science\, and essays from the three category winners will be published in online issue. \n\n\n\nAll four winners of the Science & SciLifeLab Prize for Young Scientists are invited to Sweden December 9-14 to participate in a unique week filled with events in honor of science. They will have the opportunity to meet with leading scientists in their field of research and create life-long connections to support their careers.  \n\n\n\nThe four winners 2023 are \n\n\n\nZuzanna Kozicka\n\n\n\nMolecular Medicine\, Grand Prize WinnerEssay: Gluing the pieces together: Illuminating the path to degrading troublesome proteins \n\n\n\nRachel Kratofil\n\n\n\nCell and Molecular BiologyEssay: Working up an appetite to promote repair: Immune-derived hunger hormones restore tissue post-infection \n\n\n\nYodai Takei\n\n\n\nGenomics\, Proteomics\, and Systems Biology ApproachesEssay: Imaging nuclear architecture in single cells: Multiplexed imaging technologies uncover precise 3D maps of single nuclei \n\n\n\nJessica Kendall-Bar\n\n\n\nEcology and EnvironmentEssay: Lessons from sleep in the deep: Records of seal sleep at sea reveal extreme sleep duration flexibility \n\n\n\nFor the 10th anniversary of Science and SciLifeLab Prize\, we have invited 2014 year’s category winner Chelsea Wood to give a keynote lecture with the title; Is the world wormier than it used to be? Answers from a new subdiscipline: the historical ecology of parasitism. \n\n\n\nProgram\n\n\n\nProgram flyer_Prize_A4_01 (2)Download\n\n\n\n\n\n\n\nChelsea Wood – Bio\n\n\n\nRead more About the Prize\n\n\n\nPlease contact events@scilifelab.se if you have any questions. URL:https://www.scilifelab.se/event/science-scilifelab-prize-symposium-2023/ LOCATION:Beijersalen\, Kungl. Vetenskapakademien\, Lilla Frescativägen 4A\, Stockholm\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/10/Thumbnail-.png ORGANIZER;CN="Science/AAAS and SciLifeLab":MAILTO:events@scilifelab.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231213T133000 DTEND;TZID=Europe/Stockholm:20231213T153000 DTSTAMP:20260404T090037 CREATED:20231124T121410Z LAST-MODIFIED:20231211T115110Z UID:10001041-1702474200-1702481400@www.scilifelab.se SUMMARY:Stronger together; Making space on Team Science for Diverse Career Paths DESCRIPTION:Science & SciLifeLab Webinar \n\n\n\nBy harnessing different types of expertise and offering several diverse career paths in research\, the definition of what it means to be a life scientist can be broadened and inclusive of a wide array of skill-sets. In this panel discussion\, broadcasted live by Science\, the panel will explore how life scientists can foster a future that maximizes the potential of each researcher and the field overall. \n\n\n\nIn this discussion\, participants will \n\n\n\n\nLearn about how career paths can be diversified and how diverse backgrounds bring value to research excellence\, innovation\, and problem-solving.\n\n\n\nGain insights into why team science is key for multidisciplinary research and collaboration. \n\n\n\nHear how universities and other employers can support individuals pursuing non-traditional career paths in science and build inclusive research communities.\n\n\n\nTake part in shaping the future of research incentives and other drivers of open science.\n\n\n\n\n\n\n\n\nProgram\n\n\n\n\n13.30 Coffee and mingle at IVA conference center \n\n\n\n14.15 Everyone seated in the Wallenberg lecture hall \n\n\n\n14.30 Panel discussion \n\n\n\n15.15 Q&A from the audience \n\n\n\n\nPanel\n\n\n\nAnnika Jenmalm Jensen\, Infrastructure director at SciLifeLab \n\n\n\nChelsea Wood\, Associate professor University of Washington and Science & SciLifeLab Prize Winner 2014 \n\n\n\nDavid Seekell\, Head of Sustainable Investing at Atle and Science & SciLifeLab Prize Winner 2016 \n\n\n\nErik Lindahl\, professor Stockholm University \n\n\n\nModerator\n\n\n\nSacha Vignieri\, Deputy Editor for Research at AAAS/Science magazine \n\n\n\nRegistration URL:https://www.scilifelab.se/event/stronger-together-making-space-on-team-science-for-diverse-career-paths/ LOCATION:IVA Conference center\, Grev Turegatan 16\, Stockholm CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/11/W-23.12.13_SciLifeLab_presentation_3072-x-1296_v1.png ORGANIZER;CN="Science/AAAS and SciLifeLab":MAILTO:events@scilifelab.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231213T153000 DTEND;TZID=Europe/Stockholm:20231213T163000 DTSTAMP:20260404T090037 CREATED:20231129T164303Z LAST-MODIFIED:20231129T164314Z UID:10001052-1702481400-1702485000@www.scilifelab.se SUMMARY:Molecular Design of the Kidney Filtration Barrier DESCRIPTION:Prof. Thomas Benzing\, University Hospital ofCologne\, Germany \n\n\n\nProf. Thomas Benzing will in this talk describe how his group has over the past years made novel discoveries regarding the molecular mechanisms of kidney filtration. Many of these findings are the result of a collaboration with researchers at SciLifeLab/KTH. \n\n\n\nMost welcome! URL:https://www.scilifelab.se/event/molecular-design-of-the-kidneyfiltration-barrier/ LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden CATEGORIES:Event ORGANIZER;CN="David Unnersj%C3%B6 Jess":MAILTO:david.unnersjojess@scilifelab.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231215T140000 DTEND;TZID=Europe/Stockholm:20231215T160000 DTSTAMP:20260404T090037 CREATED:20231208T154608Z LAST-MODIFIED:20231214T142842Z UID:10001065-1702648800-1702656000@www.scilifelab.se SUMMARY:Activity-regulated organization of neuronal protein at the molecular scale DESCRIPTION:Mini symposium on “Activity-regulated organization of neuronal protein at the molecular scale” \n\n\n\nFor attendees without SciLifeLab access\, we will meet you at the reception of SciLifeLab at 1.50 pm. \n\n\n\n\n\n\n\n \n\n\n\nProgram\n\n\n\n2.00 – 3.00 PM \n\n\n\nMolecular function of Arc in brain plasticity: from hub protein to retroviral-like capsid \n\n\n\nClive Bramham\, University of Bergen\, Norway \n\n\n\n3.00 – 4.00 PM \n\n\n\nDeciphering the spatiotemporal and mechanical regulation of adhesive and cytoskeletal structures at the nanoscale \n\n\n\nGrégory Giannone\, CNRS\, University of Bordeaux\, UMR5297\, Interdisciplinary Institute for Neuroscience\, France \n\n\n\n\n\n\n\n \n\n\n\n \n\n\n\nEvent_Bramham-and-Giannone_locationDownload URL:https://www.scilifelab.se/event/activity-regulated-organization-of-neuronal-protein-at-the-molecular-scale/ LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden CATEGORIES:Event ORGANIZER;CN="Mariline Silva":MAILTO:mariline.silva@scilifelab.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20231218T151500 DTEND;TZID=Europe/Stockholm:20231218T161500 DTSTAMP:20260404T090037 CREATED:20231123T133956Z LAST-MODIFIED:20231123T134046Z UID:10001039-1702912500-1702916100@www.scilifelab.se SUMMARY:[The Svedberg seminar] - Describing tissue pathogenesis with spatial technologies DESCRIPTION:Sanja Vickovic \n\n\n\nWallenberg Academy Fellow and SciLifeLab FellowDepartment of Immunology\, Genetics and Pathology at Uppsala University \n\n\n\n \n\n\n\n\n\n\n\nBio\n\n\n\nDr. Vickovic is currently a Wallenberg Academy Fellow and SciLifeLab Fellow at the Department of Immunology\, Genetics and Pathology at Uppsala University. Dr. Vickovic received her PhD in Gene Technology from the Royal Institute of Technology in Stockholm. Following her graduate work\, Dr. Vickovic joined the Broad Institute of MIT and Harvard\, Columbia University and the New York Genome Center before continuing in her current role as Assistant Professor at Uppsala University. Dr. Vickovic has extensively worked on pioneering novel spatially resolved transcriptomics and genomics methods that enable massively parallel in situ profiling of intact tissue samples.  \n\n\n\nDescribing tissue pathogenesis with spatial technologies\n\n\n\nAbstract: Spatial and molecular characteristics determine tissue function\, yet high-resolution methods to capture both concurrently are lacking. In recent years\, we developed high-definition spatial transcriptomics and multi-omics technologies\, which captures RNA\, protein information or microbiota from histological tissue sections on spatially barcoded arrays. Today\, I will present how these different technologies were developed and are applied in different biological settings. \n\n\n\n \n\n\n\n\n\n\n\nHost: Ulf Landegren ulf.landegren@igp.uu.se\, UU URL:https://www.scilifelab.se/event/the-svedberg-seminar-sanja-vickovic/ LOCATION:BMC Room C8:301\, Husargatan 3\, Uppsala\, Sweden CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/02/Picture1-The-Svedberg.png ORGANIZER;CN="The Svedberg Seminar Series":MAILTO:thesvedberg@scilifelab.uu.se END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20240112T110000 DTEND;TZID=Europe/Stockholm:20240112T120000 DTSTAMP:20260404T090037 CREATED:20231206T165224Z LAST-MODIFIED:20231207T151005Z UID:10001062-1705057200-1705060800@www.scilifelab.se SUMMARY:Calls for new project support in chemical biology and drug discovery DESCRIPTION:The chemical biology unit (CBCS) and the Drug discovery and development (DDD) platform at SciLifeLab have calls out for projects – see https://anubis.scilifelab.se \n\n\n\nCBCS is looking for projects in Chemical Biology which includes assay development for small molecule screening and profiling\, as well as enabling chemistry. For more information\, please visit www.cbcs.se. \n\n\n\nThe DDD platform has a call looking for new project proposals for drug discovery. All therapeutic modalities that can be developed in collaboration with the DDD platform at SciLifeLab are of interest\, including small molecules\, antibodies\, oligonucleotides and new modalities. \n\n\n\nSome users and projects are at the intersection between chemical biology and drug discovery. We believe this webinar will help you to find out were your project fits in best. \n\n\n\nsign up here\n\n\n\nProgram: \n\n\n\n1. Presentation of CBCS offerings2. Presentation of the DDDp offerings3. Q&A \n\n\n\nOrganizer: the Chemical Biology Consortium Sweden and the Drug Discovery & Development platform URL:https://www.scilifelab.se/event/calls-for-new-project-support-in-chemical-biology-and-drug-discovery-2/ LOCATION:Online event via Zoom CATEGORIES:Event END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20240112T130000 DTEND;TZID=Europe/Stockholm:20240112T140000 DTSTAMP:20260404T090037 CREATED:20231220T101638Z LAST-MODIFIED:20240112T114300Z UID:10001072-1705064400-1705068000@www.scilifelab.se SUMMARY:DDLS Data Science Node information DESCRIPTION:Welcome to a brief update on the status of the Data Science Node (DSN) for Cell and Molecular Biology (CMB) and information about a community survey that will open after this meeting. Data Science Node management\, Sverker Holmgren and Thomas Svensson will describe the survey and answer questions. The event is open to everyone. Please register to get the Zoom link in your mailbox. You can pre-send input or questions regarding the DSN in CMB to Sverker and Thomas in the registration form. \n\n\n\n\n\n\n\n\n \n\n\n\nRegistration\n\n\n\n\n\nSurvey\n\n\n\nLink to Survey\n\n\n\n\nRead more about DDLS Data Science Nodes URL:https://www.scilifelab.se/event/ddls-data-science-node-information/ CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/03/CMB_web.png END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20240115T150000 DTEND;TZID=Europe/Stockholm:20240115T160000 DTSTAMP:20260404T090037 CREATED:20231227T115931Z LAST-MODIFIED:20231227T120134Z UID:10001077-1705330800-1705334400@www.scilifelab.se SUMMARY:Genomics\, Imaging and AI - three technologies which are changing biological research and clinical practice DESCRIPTION:Prof. Ewan Birney is Deputy Director General of EMBL and Joint Director of EMBL-EBI. Prof. Birney will come to Stockholm to give a talk on Jan 15 from 15:00 to 16:00 at Biomedicum\, KI Campus Solna. Come and listen to an exciting talk about the next steps in medical research! \n\n\n\nJan 15 at 15:00 – 16:00 \n\n\n\nEva & Georg Klein Conference hall\, Biomedicum\, Solnavägen 9 \n\n\n\nWelcome! \n\n\n\nProf. Ewan Birney flyer Jan 15Download flyer URL:https://www.scilifelab.se/event/genomics-imaging-and-ai-three-technologies-which-are-changing-biological-research-and-clinical-practice/ LOCATION:Eva & Georg Klein lecture hall\, Biomedicum\, Karolinska Institutet\, Solnavägen 9\, Solna\, Solnavägen 9\, Solna CATEGORIES:Event ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/09/SciLifeLab_EMBL-e1678190893272.jpg END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20240118T090000 DTEND;TZID=Europe/Stockholm:20240118T150000 DTSTAMP:20260404T090037 CREATED:20231208T120428Z LAST-MODIFIED:20231208T120459Z UID:10001064-1705568400-1705590000@www.scilifelab.se SUMMARY:Opening of the Lightsheet 7 at the Centre for Cellular Imaging DESCRIPTION:The Centre for Cellular Imaging is pleased to announce the purchase and installation of the Lightsheet 7 fluorescence microscopemicroscope. \n\n\n\nLight sheet fluorescence microscopy (LSFM) uses a thin sheet of light to excite only fluorophores within the focal volume. It is ideal for fast and gentle imaging of whole living model organisms\, tissues\, and cells as they develop – over extended periods of time. Furthermore\, the Lightsheet 7 is designed to handle large optically cleared specimens with subcellular resolution. Dedicated optics\, sample chambers\, and holders allow adaption to the refractive index of the chosen clearing method. \n\n\n\nThe Lightsheet 7 is now installed at the Centre for Cellular Imaging and to celebrate this we will host an “Opening Day” with seminars and demos\, where you can learn about this technology and other types of equipment available at the CCI.Please join us on January 18th to explore what is possible with this new instrumentation! \n\n\n\nRegistration deadline: January 11th \n\n\n\nregistration URL:https://www.scilifelab.se/event/opening-of-the-lightsheet-7-at-the-centre-for-cellular-imaging/ LOCATION:Birgit Thilander Lecture Hall\, Medicinaregatan 3\, Göteborg CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2023/12/banner-ls7.png END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20240119T100000 DTEND;TZID=Europe/Stockholm:20240119T110000 DTSTAMP:20260404T090037 CREATED:20240115T114456Z LAST-MODIFIED:20240116T094413Z UID:10001107-1705658400-1705662000@www.scilifelab.se SUMMARY:AICell Lab -- Building AI Systems for Human Cell Modeling and Simulation DESCRIPTION:NBIS\, Scilifelab’s Bioinformatics platform\, arranges an open AI and IO Seminar Series aimed at knowledge-sharing about Artificial Intelligence and Integrative Omics (AI & IO) analysis and applications in the Life Science community. The seminar series is open to everyone. The seminar is run over Zoom on the third Friday of the month during academic terms\, typically between 10 and 11 am\, with ca. 45 min long presentation and 15 min discussion. \n\n\n\nFor further info\, please see this website. \n\n\n\n \n\n\n\n\n\n\n\nAICell Lab — Building AI Systems for Human Cell Modeling and Simulation\n\n\n\nWei Ouyang\, DDLS fellow\, Royal Institute of Technology\, KTH \n\n\n\nThe AICell Lab is a newly founded group by the Data-Driven Life Science fellows program at the department of applied physics at KTH. The lab is dedicated to building artificial intelligence (AI) systems for cell and molecular biology\, with the ultimate goal of modeling the human cell and building human cell simulators using powerful AI models. The lab’s approach to this grand challenge involves not only innovations in data analysis and modeling\, but also in data generation\, specifically the creation of an automated imaging farm equipped with multiple microscopes\, robotic arms\, liquid handling robots\, and automatic incubators. The lab’s AI software infrastructure enables real-time augmentation of microscopy views\, generating artificial labels and annotations\, and optimizing experimental conditions to capture rare events in live cells. The long-term goal of the AICell Lab is to create large-scale whole human cell models trained on existing multi-omics datasets and new data generated by the imaging farm\, which have the potential to revolutionize in-silico cell experimentation and drug discovery while contributing to a holistic and systematic understanding of the human cell. \n\n\n\nClick here to join zoom conference URL:https://www.scilifelab.se/event/ai-approach-to-cell-and-molecular-biology/ LOCATION:Online event via Zoom CATEGORIES:Event END:VEVENT BEGIN:VEVENT DTSTART;TZID=Europe/Stockholm:20240119T130000 DTEND;TZID=Europe/Stockholm:20240119T140000 DTSTAMP:20260404T090037 CREATED:20240110T132404Z LAST-MODIFIED:20240110T132648Z UID:10001102-1705669200-1705672800@www.scilifelab.se SUMMARY:Webinar: SiMSen-seq\, new tool for ultrasensitive detection of circulating tumor DNA in childhood malignancies DESCRIPTION:Next up on the Clinical Genomics Webinar Series: \n\n\n\nClinical Genomics Gothenburg has organised an exciting new webinar to be held on Friday 19th January 2024 at 13:00 on Zoom (click here to join). \n\n\n\nIn the seminar: “SiMSen-seq: A new tool for ultrasensitive detection of circulating tumor DNA in childhood malignancies”\, focuses on ultrasensitive sequencing\, Martin Dalin\, sheds light on a clinical application of SiMSen-seq. \n\n\n\nIf you have questions\, please contact the host Marcela Davila (marcela.davila@gu.se) or CG vicePCO Esther González-Padilla (esther.gonzalez-padilla@scilifelab.se). \n\n\n\nEveryone is welcome so feel free to spread the details with anyone who might be interested. \n\n\n\nMartin Dalin is a professor at Sahlgrenska Center for Cancer Research\, Wallenberg Centre for Molecular and Translational Medicine\, the Institute of Clinical Sciences\, Sahlgrenska Academy at University of Gothenburg URL:https://www.scilifelab.se/event/webinar-simsen-seq-new-tool-for-ultrasensitive-detection-of-circulating-tumor-dna-in-childhood-malignancies/ LOCATION:Online event via Zoom CATEGORIES:Event ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2024/01/SiMSen-sec_webinar.png END:VEVENT END:VCALENDAR