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BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251006T080000
DTEND;TZID=Europe/Stockholm:20251010T170000
DTSTAMP:20260408T051404
CREATED:20250207T115739Z
LAST-MODIFIED:20250818T113028Z
UID:10001480-1759737600-1760115600@www.scilifelab.se
SUMMARY:GA4GH 13th Plenary
DESCRIPTION:The not-for-profit Global Alliance for Genomics and Health (GA4GH) sets standards and frames policies to expand genomic data use within a human rights framework. \n\n\n\nGA4GH 13th Plenary brings together organisations and initiatives from the genomics and health community for keynotes\, talks\, and workshops. \n\n\n\nThe conference will focus on genomic and clinical data sharing issues that pervade diverse industries\, disciplines\, and communities. \n\n\n\nGA4GH 13th Plenary is co-hosted by SciLifeLab. \n\n\n\nAgenda \n\n\n\n6 to 7 October 2025 • 13th Plenary meeting: The global genomics community comes together to learn about and discuss challenges and opportunities in data sharing and interoperability \n\n\n\n8 to 10 September 2024 • Connect working sessions: GA4GH active contributors work to advance standards and policy frameworks for genomic and health data sharing \n\n\n\nFor more information about GA4GH 13th Plenary visit the conference web site: \n\n\n\nRead more
URL:https://www.scilifelab.se/event/ga4g-13th-plenary/
LOCATION:Uppsala Konsert & Kongress\, Vaksala torg 1\, Uppsala\, 75331\, Sweden
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Data Centre":MAILTO:datacentre@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251006T120000
DTEND;TZID=Europe/Stockholm:20251007T160000
DTSTAMP:20260408T051404
CREATED:20250827T144903Z
LAST-MODIFIED:20250910T153530Z
UID:10001594-1759752000-1759852800@www.scilifelab.se
SUMMARY:DDLS Evolution and Biodiversity meeting
DESCRIPTION:The DDLS Evolution and Biodiversity research area is organizing a network event in Umeå\, lunch-to-lunch on October 6-7\, 2025. \n\n\n\n \n\n\n\nAim of the meeting: This event provides an excellent opportunity for the DDLS Evolution and Biodiversity research area to present ongoing and future work\, get to know one another\, and organize and strengthen the growing community. We will hear about and discuss DDLS infrastructure and research support services\, such as bioinformatics support. \n\n\n\nTarget Group: DDLS Fellows and their PhD\, Postdoc group members\, Research School Member + Main PI of the Evolution and Biodiversity research area\, EB Data Science Node representative. \n\n\n\n \n\n\n\n \n\n\n\nPractical Information and Registration\n\n\n\nA registration link to the meeting is provided in the invitation letter. For questions\, contact DDLS EB project coordinator Maria Hellman\, SLU. \n\n\n\nThe EB research area will cover accommodation and meals for all participants. \n\n\n\nParticipants must cover their own travel costs\, except for Fellows and Expert Group members\, for whom SLU will arrange travel. Therefore\, Fellows and Expert Group members need to provide travel information in the registration form so that Maria Hellman\, SLU can book the travel. \n\n\n\nTo ensure smooth handling of catering\, hotel reservations\, and program details\, please respect the registration deadline of September 12. \n\n\n\nWe look forward to seeing you in Umeå! \n\n\n\n \n\n\n\nOrganizing Committee \n\n\n\nMariana P Braga and José Cerca \n\n\n\nProgram\n\n\n\nProgramme_Umeå OctoberDownload
URL:https://www.scilifelab.se/event/ddls-evolution-and-biodiversity-meeting/
LOCATION:SLU\, Skogishuset Skogsmarksgränd 17\,  Umeå
CATEGORIES:Event
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END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251009T090000
DTEND;TZID=Europe/Stockholm:20251009T120000
DTSTAMP:20260408T051404
CREATED:20250919T150229Z
LAST-MODIFIED:20250919T150230Z
UID:10001618-1760000400-1760011200@www.scilifelab.se
SUMMARY:Practical Machine Learning
DESCRIPTION:Machine learning (ML) is a rapidly growing field within artificial intelligence (AI) that focuses on building systems capable of learning from data. Instead of being explicitly programmed with detailed rules\, the ML models identify patterns and make predictions or decisions based on historical data. This approach has revolutionized many industries\, including healthcare\, finance\, marketing\, and technology\, enabling applications like personalized recommendations\, fraud detection\, and speech recognition. As the volume of data continues to grow\, understanding ML concepts and techniques becomes increasingly important for anyone interested in working with data science or building intelligent systems. \n\n\n\nThis three hour online webinar is meant to give a comprehensive introduction to the fundamental principles and practical aspects of ML. It will start from the fundamentals of ML including basic concepts\, ML types\, and representative applications of ML\, and then progress to practical techniques for data preprocessing\, model selection\, training\, evaluation\, and assessment. Participants will explore supervised (classification and regression) and unsupervised (clustering and dimensionality reduction) tasks using varied ML algorithms\, such as k-nearest neighbors (KNN)\, linear/logistic regressions\, decision tree\, random forest\, support vector machine (SVM)\, naive bayes\, k-means\, and neuron networks. \n\n\n\nFeel free to join (and leave) whenever depending on your interest. The online event is open for all present and prospective Berzelius users. \n\n\n\nPlace: Online via Zoom. The link will be provided upon registration.Time:  Thu Oct. 9th\, 2025 9:00 – 12:00\, \n\n\n\n\nRegistration\n\n\n\n\nTentative Schedule\n\n\n\nTimeContentsInstructor(s)09:00-09:10Welcome & Introduction 09:10-09:40Fundamentals of MLYonglei Wang09:40-10:15Supervised ML (I): ClassificationYonglei Wang10:15-10:50Supervised ML (II): RegressionYonglei Wang10:50-11:00Break 11:00-11:20Unsupervised ML (I): ClusteringYonglei Wang11:20-11:40Unsupervised ML (II): Dimension ReductionYonglei Wang11:40-12:00Q/A\n\n\n\n \n\n\n\nPrerequisites \n\n\n\nTo ensure a smooth learning experience\, participants should have: \n\n\n\n-(optional) an active project on Berzelius if you plan to follow along on the system \n\n\n\n-basic proficiency in Python programming (variables\, loops\, functions) and some libraries like NumPy\, Pandas\, and Matplotlib/Seaborn \n\n\n\n-familiarity with basic statistics and linear algebra concepts (e.g.\, mean\, median\, standard deviation\, vectors\, matrices) \n\n\n\n \n\n\n\nThis event is a collaboration between National Supercomputer Centre at Linköping University (NSC) and SciLifeLab Data Centre. \n\n\n\nFor questions contact yonglei.wang@liu.se or xuan.gu@liu.se  \n\n\n\n\n\n\n\n\n\n\n\n\n\n\nhttps://www.nsc.liu.se/support/Events/Berzelius_training_Oct2025
URL:https://www.scilifelab.se/event/practical-machine-learning/
LOCATION:Zoom
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251009T120000
DTEND;TZID=Europe/Stockholm:20251009T130000
DTSTAMP:20260408T051404
CREATED:20250904T111300Z
LAST-MODIFIED:20251006T140653Z
UID:10001605-1760011200-1760014800@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series: Matteo Tadiello & Emelia Karlsson
DESCRIPTION:Welcome to join the Campus Solna Seminar Series – an initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between within Campus Solna. The format consists of two 20 min talks (One speaker from the Alpha-building and one from the Gamma-building respectively)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 12:00-13:00. You can bring your lunch to the seminar. \n\n\n\nPhD students that are attending the Campus Solna Seminar lectures will have the opportunity to gain credits. For the syllabus and instructions on how to obtain these credits\, read this document. Please contact your own department at your host University to confirm.See here the full schedule for this semester. \n\n\n\nThis week:\n\n\n\n\n\n\nMatteo Tadiello\n\n\n\nArne Elofsson – alpha 6 \n\n\n\nImproving Model Selection of AlphaFold Antibody–Antigen Complexes by Learning to Rank \n\n\n\n\n\nEmelia Karlsson\n\n\n\nErik Lindahl – gamma 3 \n\n\n\nMechanism of Alkaline Gating in a Pentameric Ion Channel \n\n\n\n\n\n\nThis seminar series is organized by the PhD & Postdoc Council. For more information about the Council and other events check our page.
URL:https://www.scilifelab.se/event/campus-solna-seminar-series-9-okt-2025/
LOCATION:Milkyway SciLifeLab Solna\, Tomtebodavägen 23\, Solna
CATEGORIES:Community
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/09/IMG_20221103_120135408_HDR-scaled.jpg
ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251014T090000
DTEND;TZID=Europe/Stockholm:20251016T150000
DTSTAMP:20260408T051404
CREATED:20250930T080647Z
LAST-MODIFIED:20250930T080801Z
UID:10001622-1760432400-1760626800@www.scilifelab.se
SUMMARY:Exhibition in Navet at BMC\, Uppsala University
DESCRIPTION:On October 14-16\, between 09.00-15.00\, you have a new opportunity to visit our exhibition in Navet at BMC. This is a chance to receive information and updates from 30 of the leading life science companies in Sweden. The entrance to Navet will be open between 09:00-15:00 for external visitors.
URL:https://www.scilifelab.se/event/exhibition-in-navet-at-bmc-uppsala-university-2/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2025/09/Oktober14-16_Logos_digital-sign-scaled.jpg
ORGANIZER;CN="SciLifeLab Navet":MAILTO:lokalbokning@scilifelab.uu.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251015T110000
DTEND;TZID=Europe/Stockholm:20251015T120000
DTSTAMP:20260408T051404
CREATED:20250915T125335Z
LAST-MODIFIED:20251125T145149Z
UID:10001614-1760526000-1760529600@www.scilifelab.se
SUMMARY:Onto-what? Everything you (n)ever wanted to know about ontologies or were too embarrassed to ask
DESCRIPTION:The use of ontologies is a cornerstone of data interoperability and reusability\, representing an essential precursor to cross-domain data integration\, modelling\, knowledge discovery and even the exploitation of new AI-related technologies. Despite all this\, ontologies are still sadly underused in existing data management practices for several reasons\, including their perceived complexity\, insufficient knowledge of available tooling solutions and lack of easily accessible best practice guidance. In this session\, we will demystify the world of ontologies by clearing up some common misconceptions and provide you with an overview of existing tools and resources for using ontologies more effectively in your work. \n\n\n\nPresenter: Danielle Welter – Principal Data Scientist\, Luxembourg National Data Service (LNDS) – ELIXIR Luxembourg \n\n\n\nMore information\n\nThis event is part of the SciLifeLab Data Management seminar series\, an event series by the SciLifeLab Data Centre and NBIS joint Data Management team.The goal of the events in this seminar series is to provide interesting interactive seminars around topics related to Research Data Management and Open Science in general\, and to foster discussions around best practices. \n\n\nResearch Data Management (RDM) concerns the organization\, storage\, preservation\, and sharing of data that is collected and analyzed during a research project. Proper planning and management of research data will make project management easier and more efficient while projects are being performed. It also facilitates sharing and allows others to validate as well as reuse the data.Open Science is a set of principles and practices that aim to make scientific research from all fields accessible to everyone for the benefits of scientists and society as a whole. Open science is about making sure not only that scientific knowledge is accessible but also that the production of that knowledge itself is inclusive\, equitable and sustainable. \n\n\nThe events are open to everyone working at or affiliated with a Swedish research institute or university. We welcome all researchers\, educational professionals\, staff\, RDM professionals\, and others with an interest in life sciences\, from all university levels. The events are informal and inclusive\, so feel welcome to join and participate in our interesting discussions! \n\n\nThe events will be recorded and published openly after the seminars on the SciLifeLab YouTube channel. The slides will be made available at our SciLifeLab Data Repository. More information about SciLifeLab Data Centre and NBIS joint Data Management seminar series: https://www.scilifelab.se/data/scilifelab-data-management-seminar-series/ \n\n\nIf you have suggestions for topics or presentations\, please contact us at data-management@scilifelab.seFor more information or inquiries\, please contact us at  data-management@scilifelab.se
URL:https://www.scilifelab.se/event/datamanagement-ontologies/
LOCATION:virtual event
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2024/02/DC_seminar-series_background1-1.png
ORGANIZER;CN="Open Science Seminar Series":MAILTO:data-management@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251016T090000
DTEND;TZID=Europe/Stockholm:20251016T170000
DTSTAMP:20260408T051404
CREATED:20250912T085114Z
LAST-MODIFIED:20251016T111054Z
UID:10001613-1760605200-1760634000@www.scilifelab.se
SUMMARY:Campus Solna Science Talks 2025
DESCRIPTION:Warmly welcome to the sixth Campus Solna Science Talk – a meeting for everyone in the community to learn more about ongoing research and activities at SciLifeLab’s Campus Solna\, which aims to bring the community together\, inspire exchange and new collaborations. \n\n\n\nResearch presentations will be given by group leaders and junior researchers (selected with consideration for balance in topics\, presenters’ career stages\, and affiliations) as part of four plenary sessions that will be mixed with panel discussions. We will end the day at Delta Campus Solna with poster sessions and pub. \n\n\n\nWe invite all Campus Solna research groups to be represented with at least 1 poster (and maximum 3). Furthermore\, we want to encourage all infrastructure units\, support functions (IT\, OO\, Site support) and committees (DEI\, Public Engagement\, CSI and the PhD&Postdoc Council) to partake with posters! \n\n\n\nSeats are limited\, register today to secure your spot! \n\n\n\nRegistration\n\n\n\n\n\n\n\nProgram\n8.45Welcoming and opening of symposiumPer Ljungdahl and Jan Ellenberg9.00Session I: Molecular profilingModerator: Erik Benson9.05Nanoscale detection and chemical targeting of DNA replication at its rootBennie Lemmens9.20Illuminating DNA-RNA connectomes in single cellsMagda Bienko9.35Proteome-wide biophysicsIlaria Piazza9.50Systematic Profiling of GPCR Autoantibodies in Human DiseaseMarcus Saarinen (Jochen Schwenk lab)10.10Coffee10.40Session II: Environment and EvolutionModerator: Christopher Wheat10.45Climate-Driven Trends in Adaptive Molt PhenologyTheodore Squires (Mafalda Sousa Ferreira lab)11.00Genomics of island lineages: A data-driven approachJose Cerca (DDLS Fellow)11.15How Development Makes Evolution More PredictableLisandro Milocco (DDLS fellow)11.35Putting CoARA and Research Assessment Reform into Practice: What It Means for SciLifeLab and Swedish ResearchChris Erdmann\, Annika Jenmalm Jensen\, Joanna Sendecka12.05Lunch12.50Session III: Membrane biology and molecular networksModerator: Rebecca Howard12.55Towards structure-guided design of mRNA lipid nanoparticlesWojciech Fijalkowski (Hanna Barriga lab)13.10Using biophysical properties of immune cells to find unifying biomarkers in long COVID and Chronic Fatigue Syndrome (ME/CFS)Agnes M. Koerfer (Erdinc Sezgin lab)13.25Combining cryo-EM and simulations to study membrane structureKaran Sharma (Milka Doktorova lab)13.40From Nodes to Distributed States: Tools to Decode Mammalian BehaviorStefanos Stagkourakis14.00Leg stretch and Coffee14.20Session IV: Machine learning and drug development Moderator: Brinton Seashore-Ludlow14.25PRIME: Investigating the role of PRostate Inflammation as a Mechanism for Cancer EvolutionAlexandra Rafeletou (Arian Lundberg lab)14.40Machine Learning methods for Cancer Research & Drug DiscoveryGolnaz Taheri14:55Navigation of vast chemical spaces for drug discoveryAndreas Luttens15.10Towards clinically reliable artificial intelligence for prostate cancer pathologyNita Mulliqi (Kimmo Kartasalo lab)15.30Panel: Evolution of SciLifeLab – 15 years! From Past into the FutureModerators; Rebecca Howard and Erdinc Sezgin16.00Concluding remarksPer Ljungdahl16.15Poster session and Pub at Campus Solna\n\n\n\n\nPosters\nThere will be voting for the Best Poster Award in two different categories; “Best Design and Presentation” and “Highest Scientific Impact”. The winners will be announced towards the end of the poster session. \n\n\n\n \n\n\n\nEach group/unit is welcome to bring up to 3 posters to the grand Poster Session that will follow the talks. Submit the poster titles in the registration form. Please coordinate within your research group/unit beforehand who should bring a poster. \n\n\n\nPlease add your building and floor to the poster\, so that everyone knows where your research is taking place. \n\n\n\nPoster size; A0 or smaller in portrait orientation \n\n\n\nPosterlista Science Talks 2025Download\n\n\n\n\nScientific committee\nInci Aksoylu \n\n\n\nHaris Babačić \n\n\n\nIskra Pollack \n\n\n\nAdnane Achour \n\n\n\nErik Benson \n\n\n\nPer Ljungdahl \n\n\n\nOrganising committe\n\n\n\nDisa Hammarlöf \n\n\n\nIsolde Palombo
URL:https://www.scilifelab.se/event/campus-solna-science-talks-2025/
LOCATION:Life City\, Solnavägen 3H\, Stockholm\, 113 64
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/09/Fasad-SciLifeLab-Solna-2022-2-1-scaled.jpeg
ORGANIZER;CN="SciLifeLab Event":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251016T130000
DTEND;TZID=Europe/Stockholm:20251016T170000
DTSTAMP:20260408T051404
CREATED:20250916T133009Z
LAST-MODIFIED:20250916T133010Z
UID:10001615-1760619600-1760634000@www.scilifelab.se
SUMMARY:Deploying Trustworthy AI in Healthcare – Validation and Adoption
DESCRIPTION:16 October: Welcome to an afternoon focused on how to develop\, validate\, and adopt AI in healthcare. This gathering will bring together healthcare providers\, companies\, policymakers\, and service providers promoting AI development. \n\n\n\nThe event is organized by TEF-Health in collaboration with Health Data Sweden\, two EU initiatives supporting AI development from lab to market\, and KI Science Park. \n\n\n\nThis meeting is in-person only\, so make sure to join us at the venue at Karolinska Institutet! \n\n\n\nRegistration
URL:https://www.scilifelab.se/event/deploying-trustworthy-ai-in-healthcare-validation-and-adoption/
LOCATION:Eva & Georg Klein lecture hall\, Biomedicum\, Karolinska Institutet\, Solnavägen 9\, Solna\, Solnavägen 9\, Solna
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251017T100000
DTEND;TZID=Europe/Stockholm:20251017T110000
DTSTAMP:20260408T051404
CREATED:20251008T090307Z
LAST-MODIFIED:20251008T090308Z
UID:10001633-1760695200-1760698800@www.scilifelab.se
SUMMARY:Training AI models to predict a person’s health status and biological age from DNA methylation data
DESCRIPTION:Speaker: Maria Lerm\, Linköping university. \n\n\n\nNBIS and SciLifeLab Data Centre arrange an open SciLifeLab AI Seminar Series aimed at knowledge-sharing about Artificial Intelligence and applications in the Life Science community. The seminar series is open to everyone. The seminar is run over Zoom on the third Friday of the month during academic terms\, typically between 10 and 11 am\, with approx. 45 min presentation and 15 min discussion. \n\n\n\nAbstractPrecision medicine has long been synonymous with genomics\, yet this narrow view overlooks the profound influence of an individual’s lifestyle\, environmental exposures\, infections\, and other stressors on disease risks of common diseases. In fact\, the lasting epigenetic marks caused by these stressors predict disease risks far more powerfully than identification of disease-predisposing genetic variants. \n\n\n\nIn this talk I will tell you about our project in which we train AI models on rich health data and DNA methylome data to make predictions regarding a persons biological age as well as cardiovascular\, metabolic and lung health. I will reveal how the unique explainability built into our AI architecture can find causality in cellular processes contributing to ageing on an individual basis. \n\n\n\nContactFor questions\, contact bengt.sennblad@scilifelab.se \n\n\n\n\nZoom link
URL:https://www.scilifelab.se/event/training-ai-models-to-predict-a-persons-health-status-and-biological-age-from-dna-methylation-data/
LOCATION:
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251021T120000
DTEND;TZID=Europe/Stockholm:20251022T153000
DTSTAMP:20260408T051404
CREATED:20250319T084058Z
LAST-MODIFIED:20251020T092843Z
UID:10001506-1761048000-1761147000@www.scilifelab.se
SUMMARY:Workshop on Enhancing Cross-Platform Collaboration in Integrative Structural Biology
DESCRIPTION:Integrative Structural Biology (ISB) is a rapidly advancing field that relies on the integration of diverse datasets\, such as those from Cryo-electron microscopy\, X-ray crystallography\, NMR\, Mass spectrometry and Modeling. By integrating different structural techniques we can solve the structure of challenging biological systems\, which wouldn’t be possible using a single type of data. However\, the current landscape is fragmented\, with significant challenges in data interoperability\, tool integration\, and cross-disciplinary collaboration. The primary objective of this workshop is to foster cross-platform collaboration by bringing together key stakeholders from experimental and computational platforms. \n\n\n\nThe workshop aims: To facilitate the exchange of ideas and experiences\, define the technical and scientific requirements for an Integrative Structural Biology Portal and engage with experts in multimodal data analysis.  \n\n\n\nThis event is organized by SciLifeLab Lund and the Integrated Structural Biology Platform. \n\n\n\nRegister HERE\n\n\n\nScientific Committee:Cecilia Persson\, University of GothenburgEsko Oksanen\, Lund University/ESSNicholas Pearce\, Linköping UniversityWolfgang Knecht\, Lund UniversityWojtek Potrzebowski\, SciLifeLab Lund \n\n\n\nLocal Organizing Committee:Wojtek Potrzebowski\, SciLifeLab LundAnabella Aguilera\, SciLifeLab LundSophie Hellstrand\, SciLifeLab Lund \n\n\n\nSchedule \n\n\n\nDay 1  \n\n\n\n\n12:00 – 13:00 Registration & Lunch  \n\n\n\n\n\n13:00 – 13:10 Welcome\n\n\n\n\n\n13:10 – 13:55 Keynote Harald Schwalbe\, Johann Wolfgang Goethe-University\, Frankfurt\, “The future of integrated structural biology – selected examples from the European Integrated Infrastructure: Instruct-ERIC”\n\n\n\n\n\n13:55 – 14:15 Giulio Tesei\, Malmö University\, “Data-driven modeling of intrinsically disordered and multi-domain proteins”  \n\n\n\n\n\n14:15 – 14:30 Nabanita Mandal\, Lund University\, “Unraveling the Conformational Landscape of Amyloid Precursor Protein Intracellular Domain” \n\n\n\n\n\n14:30 – 15:00 Coffee Break\n\n\n\n\n\n15:00 – 15:45 Keynote: Max Bonomi\, Institut Pasteur\, France\, “Probabilistic approaches for integrative structural biology”\n\n\n\n\n\n15:45 – 16:15 Ingemar André\, Lund University\, “How to optimally combine experimental data with molecular modeling to describe the structure of complex protein mixtures in solution”\n\n\n\n\n\n16:15 – 16:30 Malin Bäckström\, University of Gothenburg\, “Protein Production Sweden – a national research infrastructure for protein production”\n\n\n\n\n\n16:30 – 17:15 Bridging the Gaps: Tackling Real-World Challenges in Integrative Structural Biology. (A panel discussion on supporting users in navigating experimental design\, data integration\, and reproducibility in integrative structural biology)\n\n\n\n\n\n17:15 – 17:30 Javier Fernandez Collado\, ThermoFisher Scientific\, “High throughput\, high resolution: Pushing the limits of structure determination with Cryo-TEMs and SmartEPU” \n\n\n\n\n\n17:30 – 19:30 Workshop Mingle\n\n\n\n\nDay 2  \n\n\n\n\n08:45 – 09:00 Coffee\n\n\n\n\n\n09:00 – 09:40 Björn Forsberg\,  Linköping University\, “Tools and perspectives for cryo-EM processing to answer biological questions”\n\n\n\n\n\n09:40 – 10:10 Mikael Akke\, Lund University\, “Resolving Protein–Ligand Binding Pathways by NMR Relaxation”\n\n\n\n\n\n10:10 – 10:30 Coffee Break\n\n\n\n\n\n10:30 – 11:15 Keynote: Karin Lindkvist\, Lund University\, “Aquaporins in health and disease“\n\n\n\n\n\n11:15 – 11:35 Nandan Haloi\, KTH\, “Protein dynamics in the data-driven era”\n\n\n\n\n\n11:35 – 11:50 Carl G. Henning Hansen\, University of Copenhagen\, “A Bayesian approach to interpret time-resolved experiments using molecular simulations”  \n\n\n\n\n\n11:50 – 12:20 Pablo Villanueva-Perez\, Lund University\, “AI for 3D and 4D (3D+time) inverse problems” \n\n\n\n\n\n12:20 – 13:15 Lunch\n\n\n\n\n\n13:15 – 13:45 Claudio Mirabello\, Linköping University\, “Integration of experimental restraints in protein structure predictions with AlphaFold” \n\n\n\n\n\n13:45 – 14:30 Panel Discussion: Multi-Modal AI: The Next Frontier in Structural Biology?\n\n\n\n\n\n14:30 – 15:00 Final Plenary: Strategic Roadmap for Future Collaboration 
URL:https://www.scilifelab.se/event/workshop-on-enhancing-cross-platform-collaboration-in-integrative-structural-biology/
LOCATION:The Loop\, Rydbergs torg 4\, Lund\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251021T153000
DTEND;TZID=Europe/Stockholm:20251021T170000
DTSTAMP:20260408T051404
CREATED:20251013T140805Z
LAST-MODIFIED:20251013T140807Z
UID:10001635-1761060600-1761066000@www.scilifelab.se
SUMMARY:Molecular Mechanism of RNA Splicing by the Spliceosome
DESCRIPTION:Seminar by Yigong ShiWestlake University\, Hangzhou\, Zhejiang 310024\, China \n\n\n\nHost: David Drew\, SciLifeLab \n\n\n\nSplicing of the precursor messenger RNA (pre-mRNA) is an indispensable step in the information flow from DNA to protein in all eukaryotes. Research of the past four decades has led to accumulation of a large body of biochemical and genetic information on pre-mRNA splicing. Structural information is central to the elucidation of the molecular mechanism of pre-mRNA splicing by the spliceosome. In 2015\, we reported the first atomic structure of an intact spliceosome from S. pombe at an average resolution of 3.6 Å. This structure reveals the overall organization and the conserved atomic features of an intact spliceosome\, which turns out to be a protein-orchestrated metalloribozyme. Since then\, atomic structures have been reported for nearly all major functional states of the spliceosome\, allowing recapitulation of the entire splicing cycle and mechanistic understanding of RNA splicing. In this presentation\, I will summarize these advances and discuss implications on disease treatment.
URL:https://www.scilifelab.se/event/molecular-mechanism-of-rna-splicing-by-the-spliceosome/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Event":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251022T151500
DTEND;TZID=Europe/Stockholm:20251022T161500
DTSTAMP:20260408T051404
CREATED:20251006T082124Z
LAST-MODIFIED:20251006T082126Z
UID:10001631-1761146100-1761149700@www.scilifelab.se
SUMMARY:[The Svedberg seminar]-Molecular Mechanism of RNA Splicing by the Spliceosome
DESCRIPTION:Yigong ShiProfessor School of Life Sciences\, Westlake University\, Hangzhou\, China \n\n\n\n \n\n\n\nTHE LENNART PHILIPSON MEMORIAL LECTURE 2025 \n\n\n\nLecture hall A1:107a\, BMC\, Uppsala University Wednesday\, October 22\, 2025 at 3:15 pm   \n\n\n\nBio \n\n\n\nProfessor Yigong Shi is a biophysicist and the current president of Westlake University. He received aBachelor of Science from Tsinghua University in 1989 and a Doctor of Philosophy in molecularbiophysics from Johns Hopkins University in 1995. Yigong Shi has been the Warner-Lambert/Parke-Davis Professor in the department of Molecular Biology at Princeton University. Since 2008\, hecontinued his career at Tsinghua University\, where he was appointed Dean of Tsinghua’s School ofLife Sciences. In 2018\, he became the founding and first president of Westlake University\, a newlyestablished private university in Hangzhou.His laboratory combines structural biology\, biochemical and biophysical approaches to elucidate themolecular and chemical basis of fundamental cellular events\, with a particular interest inspliceosome-catalyzed pre-mRNA splicing\, the mechanism of regulated intramembrane proteolysis\,and the initiation of apoptosis.Yigong Shi’s laboratory has been working on the structural elucidation of the spliceosome since 2008.Initially\, his lab solved the crystal structures of select spliceosomal components. In the summer of2015\, they published two seminal papers on the intact\, functional yeast spliceosome structure at 3.6-Å resolution. Since then\, they have reported the cryo-EM structures of the yeast spliceosome inseven states and human spliceosome in three states\, which together elucidate the choreography ofthe assembly and catalysis of the spliceosome.Representative publications and an animation (https://ygshi.org/research?0) on the spliceosomehighlight the essence of this year’s Lennart Philipson Memorial Lecture:Hang J\, Wan R\, Yan C\, Shi Y. Structural basis of pre-mRNA splicing. Science. 2015;349(6253):1191-8.Yan C\, Hang J\, Wan R\, Huang M\, Wong CC\, Shi Y. Structure of a yeast spliceosome at 3.6-angstromresolution. Science. 2015;349(6253):1182-91. Yan C\, Wan R\, Shi Y. Molecular Mechanisms of premRNASplicing through Structural Biology of the Spliceosome. Cold Spring Harb Perspect Biol.2019;11(1):a032409.Welcome!
URL:https://www.scilifelab.se/event/the-svedberg-seminar-yigong-shi/
LOCATION:BMC Lecture hall A1:107a\, BMC\, Husargatan 3\, Uppsala\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/02/Picture1-The-Svedberg.png
ORGANIZER;CN="The Svedberg Seminar Series":MAILTO:thesvedberg@scilifelab.uu.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251023T090000
DTEND;TZID=Europe/Stockholm:20251023T170000
DTSTAMP:20260408T051404
CREATED:20250513T084327Z
LAST-MODIFIED:20251022T092652Z
UID:10001548-1761210000-1761238800@www.scilifelab.se
SUMMARY:SciLifeLab Lund Day 2025
DESCRIPTION:Welcome to SciLifeLab Lund Day 2025!Join us for a dynamic day that brings together researchers\, technology platforms\, and strategic research initiatives to spotlight the powerful synergies driving life science forward in southern Sweden. \n\n\n\nThis year’s program will feature: \n\n\n\n\nOpportunity to interact with SciLifeLab cutting-edge technologies and national resources: Cellular & Molecular Imaging\, Integrated Structural Biology\, Clinical Genomics\, Genomics\, Metabolomics & Exposomics\, Proteomics\, Spatial Biology\, NBIS\, Training Hub\, DDLS program.\n\n\n\nA spotlight session on Lund University’s Strategic Research Areas (SFOs) and their collaboration with SciLifeLab platforms. SFOs confirmed: EXODIAB\, Stem Therapy\, Multipark and LUCC.\n\n\n\nA session highlighting alternative career paths in science: key roles in research infrastructure\, data science and scientific coordination\n\n\n\nTeaming up with LU innovation\, LU ventures and SmiLe Incubator\, we will explore how academic research can be translated into real-world innovations\n\n\n\n\nWhether you’re a student\, researcher or part of the broader life science community\, SciLifeLab Lund Day is your opportunity to connect\, explore\, and collaborate! \n\n\n\nDigital booklet & program\n\n\n\nPowered By EmbedPress
URL:https://www.scilifelab.se/event/scilifelab-lund-day-2025/
LOCATION:LUX Aula\, Helgonavägen 3\, Lund\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251023T120000
DTEND;TZID=Europe/Stockholm:20251023T130000
DTSTAMP:20260408T051404
CREATED:20250904T111433Z
LAST-MODIFIED:20251026T145745Z
UID:10001606-1761220800-1761224400@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series: Luke White & Bruno Stojcic
DESCRIPTION:Welcome to join the Campus Solna Seminar Series – an initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between within Campus Solna. The format consists of two 20 min talks (One speaker from the Alpha-building and one from the Gamma-building respectively)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 12:00-13:00. You can bring your lunch to the seminar. \n\n\n\nPhD students that are attending the Campus Solna Seminar lectures will have the opportunity to gain credits. For the syllabus and instructions on how to obtain these credits\, read this document. Please contact your own department at your host University to confirm.See here the full schedule for this semester. \n\n\n\nThis week:\n\n\n\n\n\n\nLuke White\n\n\n\nVicent Pelechano – gamma 5 \n\n\n\nDevelopment of a method to identify subcellular localization of RNA in tissue \n\n\n\n\n\nBruno Stojcic\n\n\n\nHjalmar Brismar – gamma 3 \n\n\n\nInvestigating Na\,K-ATPase clustering on the plasma membrane using MINFLUX nanoscopy \n\n\n\n\n\n\nThis seminar series is organized by the PhD & Postdoc Council. For more information about the Council and other events check our page.
URL:https://www.scilifelab.se/event/campus-solna-seminar-series-23-okt-2025/
LOCATION:Milkyway SciLifeLab Solna\, Tomtebodavägen 23\, Solna
CATEGORIES:Community
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/09/IMG_20221103_124630107_HDR-scaled.jpg
ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251023T150000
DTEND;TZID=Europe/Stockholm:20251023T160000
DTSTAMP:20260408T051404
CREATED:20251014T133925Z
LAST-MODIFIED:20251015T063536Z
UID:10001636-1761231600-1761235200@www.scilifelab.se
SUMMARY:GCIB-SIMS for the analysis of clinical samples
DESCRIPTION:This month’s Mass Spectrometry Imaging webinar will introduce the principles of Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) imaging using a Gas Cluster Ion Beam (GCIB) as the primary ion source. The seminar will cover the fundamentals\, capabilities\, and key applications of this powerful technique\, with a special focus on its use in clinical research. \n\n\n\n \n\n\n\n🕒 Time: 15:00–16:00 (presentation and discussion)☕ Followed by: Informal discussion with the speaker\, 16:00–16:30📍 Format: Zoom \n\n\n\n\nZoom link\n\n\n\n\n\n\nSpeaker\n\n\n\nProf. John Fletcher is a leading expert in secondary ion mass spectrometry (SIMS) imaging\, particularly in developing methods for biological and clinical applications. He studied Chemistry at the University of Manchester Institute of Science and Technology (UMIST) and completed his PhD in 2004 under Prof. John Vickerman. After several years of research at the University of Manchester—spanning atmospheric science\, instrument development\, and bioimaging—he moved to Sweden in 2012. Prof. Fletcher is now Professor of Analytical Chemistry at the University of Gothenburg\, where his research focuses on applying advanced mass spectrometry imaging techniques to life science.
URL:https://www.scilifelab.se/event/gcib-sims-for-the-analysis-of-clinical-samples/
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2025/10/IMS-seminar-October-2025_banner-scaled.png
ORGANIZER;CN="SciLifeLab Gothenburg":MAILTO:gothenburg@scilifelab.se
LOCATION:
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251028T111500
DTEND;TZID=Europe/Stockholm:20251028T130000
DTSTAMP:20260408T051404
CREATED:20251002T124749Z
LAST-MODIFIED:20251003T044445Z
UID:10001623-1761650100-1761656400@www.scilifelab.se
SUMMARY:Lunch & Learn Seminar: COMET & Multiomics Capabilities
DESCRIPTION:Discover spatial multiomics on COMET™ by engaging directly with expert scientists. Experience firsthand how you can simultaneously detect RNA and protein markers within the same tissue section\, all at a subcellular resolution.  \n\n\n\nOur protease-free\, fully-automated workflow enables multiomics scalability for all stages of research. Are you interested in elevating your spatial biology projects with our multiomics solutions? Contact us now to arrange a detailed discussion with our team of spatial biology specialists. \n\n\n\nRegister below and don’t miss the chance to win a project grant! The Spatial Proteomics Unit and Lunaphore are offering a grant worth up to 250\,000 SEK for a 10-slide COMET™ project \n\n\n\n\nOn-site: Air & Fire\, Campus Solna\, SciLifeLab (a welcome lunch will be provided\, sponsored by Lunaphore)\n\n\n\nOnline: Join via Zoom: https://kth-se.zoom.us/j/64460623520?jst=3\n\n\n\n\nRegister here\n\n\n\n\nApplication Deadline: November 4th\n\n\n\nWinner Announcement: Winners will be announced at the end of week 38\n\n\n\n\nLearn more about the grant and submit your application here: LINK
URL:https://www.scilifelab.se/event/lunch-learn-seminar-comet-multiomics-capabilities/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Spatial Proteomics Unit":MAILTO:spatial.proteomics@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251028T151500
DTEND;TZID=Europe/Stockholm:20251028T161500
DTSTAMP:20260408T051404
CREATED:20251020T071638Z
LAST-MODIFIED:20251020T072407Z
UID:10001638-1761664500-1761668100@www.scilifelab.se
SUMMARY:[Spotlight seminar] - Using cell expression profiles and CRISPR/Cas9 mutagenesis to test whether the mechanisms driving coevolution are predictable 
DESCRIPTION:Christopher Wheat\n\n\n\n\nStockholm University \n\n\n\n\n\n\n\nTitle: Using cell expression profiles and CRISPR/Cas9 mutagenesis to test whether the mechanisms driving coevolution are predictable \n\n\n\n\nShort Bio \n\n\n\n• Moved to Europe after receiving his PhD from Stanford University \n\n\n\n• where he did 1st Postdoc at Max Planck Institute for Chemical Ecology \n\n\n\n• 2nd Postdoc split between University of Helsinki and Penn State University \n\n\n\n• in 2013 Recruited to Department of Zoology where he’s now a Professor \n\n\n\n• became a Group Leader at SciLifeLab this year. \n\n\n\n\n\n \n\n\n\nAbstract: The vast majority of known species are flowering plants and the insects that eat them. While coevolutionary interactions between these two groups are hypothesized to have generated this exceptional biodiversity\, the underlying molecular mechanisms remain poorly understood. Here I review advances in a leading research system of plant insect interactions\, where gene to trait to coevolutionary connections are well established. Using ssRNAseq coupled with CRISPR/Cas9 mutagenesis\, I will present latest advances from my group towards discovering the gene regulatory networks involved and how such insights can be used to test whether mechanisms underlying coevolutionary dynamics are predictable. 
URL:https://www.scilifelab.se/event/spotlight-seminar-prof-christopher-wheat/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2023/10/Campus-solna-seminar-picture.jpg
ORGANIZER;CN="Spotlight Seminar Series":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251030T120000
DTEND;TZID=Europe/Stockholm:20251030T130000
DTSTAMP:20260408T051404
CREATED:20250904T111554Z
LAST-MODIFIED:20251027T081853Z
UID:10001607-1761825600-1761829200@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series: Luay Aswad & Konstantinos Georgiadis
DESCRIPTION:Welcome to join the Campus Solna Seminar Series – an initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between within Campus Solna. The format consists of two 20 min talks (One speaker from the Alpha-building and one from the Gamma-building respectively)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 12:00-13:00. You can bring your lunch to the seminar. \n\n\n\nPhD students that are attending the Campus Solna Seminar lectures will have the opportunity to gain credits. For the syllabus and instructions on how to obtain these credits\, read this document. Please contact your own department at your host University to confirm.See here the full schedule for this semester. \n\n\n\nThis week:\n\n\n\n\n\n\nKonstantinos Georgiadis\n\n\n\nMagda Bienko – alpha 4 \n\n\n\nDelineating genome instability dynamics in breast cancer by bulk and single cell whole genome sequencing \n\n\n\n\n\n\nThis seminar series is organized by the PhD & Postdoc Council. For more information about the Council and other events check our page.
URL:https://www.scilifelab.se/event/campus-solna-seminar-series-30-okt-2025/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Community
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/09/IMG_20221103_123412496_HDR2-scaled.jpg
ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251103T100000
DTEND;TZID=Europe/Stockholm:20251103T150000
DTSTAMP:20260408T051404
CREATED:20250904T124941Z
LAST-MODIFIED:20251024T124227Z
UID:10001600-1762164000-1762182000@www.scilifelab.se
SUMMARY:AI Agents in Life Science
DESCRIPTION:We are delighted to invite you to join our upcoming workshop on “AI Agents in Life Science”\, co-organized between SciLifeLab Data Centre and eSSENCE. AI agents are emerging as autonomous systems that orchestrate scientific workflows by interacting with digital tools and data sources. These have various implications for life science research. They can\, for example\, simplify complex analyses by automating data integration\, run computational models\, and coordinate experimental steps\, making research pipelines more efficient and reproducible. In this onsite workshop held at Trippelrummet\, Navet\, Uppsala we will introduce and discuss AI Agents in life science\, and engage in collaborative practical sessions. Welcome! \n\n\n\nDate: 2025-11-03Time: 10.00-15.00 (coffee will be served outside Trippelrummet from 9.30). Fika and lunch provided free of charge. Location: Trippelrummet\, SciLifeLab\, Uppsala. No remote participation. \n\n\n\nTarget audience: Researchers and PhD students interested in learning more about and trying hands-on exercises with AI Agents. Basic Python programming skills are required. Participants must bring their own laptop.  \n\n\n\nSpeakers and Facilitators: Ola Spjuth\,Prof. SciLifeLab AI lead\, Chris Long Huynh\, MSc\, Uppsala University\, and Mahbub Ul Alam and Johan Alfredéen\, Data Engineers (AI) at SciLifeLab Data Centre. \n\n\n\nThe workshop will feature a series of engaging presentations\, interactive discussions\, and collaborative sessions focusing on: \n\n\n\n\nIntroduction to AI agent technologies\n\n\n\nApplications\, opportunities and challenges of AI Agents in life science\n\n\n\nHands-on tutorials with reasoning models\, LangChain and MCP servers\n\n\n\nDiscussions on the role of AI agents in shaping the future of life science\n\n\n\n\nAgenda \n\n\n\n09:30-10:00 Light breakfast and networking (outside Trippelrummet) \n\n\n\n10.00-10.15 Speaker: Ola Spjuth. Presentation session 1: Introduction: Exploring how AI agents can transform life sciences \n\n\n\n10.15-10.30 Facilitators: Johan Alfredéen\, Dinh Long Huynh. Demonstration Session: AI agents in action \n\n\n\n10:30-12:00 Session Facilitators: Dinh Long Huynh\, Mahbub Ul Alam. Hands-on Session 1: Developing AI agents with LangChain & ReAct \n\n\n\n12:00-13:00 Lunch and networking (outside Trippelrummet) \n\n\n\n13:00-13:15 Speaker: Johan Alfredéen. Presentation Session 2: Deploying AI Agents: Legal\, Technical\, and Practical Considerations \n\n\n\n13:15-14:45 Session Facilitators: Mahbub Ul Alam\, Johan Alfredéen\, Dinh Long Huynh. Hands-on Session 2: AI agent collaboration with the Model Context Protocol (MCP) \n\n\n\n14:45-15:00 Speaker: Ola Spjuth. Concluding Session: Open Q&A \n\n\n\n15:00 Fika and networking (outside Trippelrummet) \n\n\n\n \n\n\n\nRegistration: Please add dietary restrictions to your registration. If you cannot join please cancel your registration. Please register with your SciLifeLab or university email.  \n\n\n\nTHE EVENT IS FULL BUT YOU CAN REGISTER TO THE WAITING LIST \n\n\n\n\nRegistration\n\n\n\n\nThis event is a collaboration between SciLifeLab Data Centre and eSSENCE. For questions please contact  ola.spjuth@scilifelab.se 
URL:https://www.scilifelab.se/event/ai-agents-in-life-science-2025/
LOCATION:BMC Trippelrummet\, Husargatan 3\, entrance C11\, Uppsala\, Sweden
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Data Centre":MAILTO:datacentre@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251103T151500
DTEND;TZID=Europe/Stockholm:20251103T161500
DTSTAMP:20260408T051404
CREATED:20251023T143342Z
LAST-MODIFIED:20251023T143343Z
UID:10001645-1762182900-1762186500@www.scilifelab.se
SUMMARY:[The Svedberg seminar] - Understanding and treating diabetes with stem cells islets
DESCRIPTION:Maike Sander \n\n\n\nProfessor Charité in Berlin\, Germany \n\n\n\n \n\n\n\n\n\n\n\nBio\n\n\n\nProf. Maike Sander’s research focuses on understanding the molecular mechanisms that regulate the formation and function of insulin-producing pancreatic beta cells\, aiming to develop new therapeutic approaches for diabetes. Her research combines genetic approaches in human stem cell–derived organoids with single-cell genomics to map pancreatic islet cell gene regulatory programs in health and disease. \n\n\n\nShe is a Professor at the Charité in Berlin\, Germany and the scientific director of the Max Delbrück Center. Prior to this\, she was a faculty member at the University of California\, San Diego\, where she led the Pediatric Diabetes Research Center. Her accolades include the Grodsky Award from the Juvenile Diabetes Research Foundation\, the Humboldt Research Award\, and the Albert Renold Prize from the European Association for the Study of Diabetes. She is an elected member of the American Society for Clinical Investigation\, the Association of American Physicians\, the German National Academy of Sciences\, EMBO\, and Academia Europaea. \n\n\n\n \n\n\n\nUnderstanding and treating diabetes with stem cells islets\n\n\n\n \n\n\n\nHuman pluripotent stem cell-derived islet cells offer an unlimited resource for diabetes research and cell therapy. Glucose-responsive\, insulin-secreting pseudo-islets (SC-islets) have been successfully generated from stem cells and are now in clinical trials for type 1 diabetes—a major step toward therapeutic use. These SC-islets comprise insulin-secreting beta cells and other endocrine cell types found in native pancreatic islets. However\, functional differences between SC-beta cells and primary human beta cells still limit their value as disease models. \n\n\n\nTo address this\, my laboratory developed an islet organoid model incorporating vascular and stromal cells within a microfluidic platform containing perfused human microvessels. Vascularization enhanced SC-beta cell function\, highlighting the importance of the islet niche. This advanced organoid system now serves as a powerful platform to study diabetes mechanisms and test therapeutics. \n\n\n\n \n\n\n\nHost: Olov Andersson olov.andersson@mcb.uu.se UU
URL:https://www.scilifelab.se/event/the-svedberg-seminar-maike-sander/
LOCATION:BMC Room C8:301\, Husargatan 3\, Uppsala\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2022/02/Picture1-The-Svedberg.png
ORGANIZER;CN="The Svedberg Seminar Series":MAILTO:thesvedberg@scilifelab.uu.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251104T120000
DTEND;TZID=Europe/Stockholm:20251104T161500
DTSTAMP:20260408T051404
CREATED:20251009T081419Z
LAST-MODIFIED:20251027T115101Z
UID:10001634-1762257600-1762272900@www.scilifelab.se
SUMMARY:Explore the Future of Genomics with Oxford Nanopore
DESCRIPTION:Join us for a half-day seminar at SciLifeLab Uppsala dedicated to Oxford Nanopore Technologies on November 4 at BMC\, Uppsala. Discover how Oxford Nanopore enables high-accuracy\, scalable sequencing across a wide range of applications\, from clinical research to biodiversity studies. Unlock the deepest level of multiomic insights on a single technology. \n\n\n\nDate: November 4 from 12:00 to 16:16 \n\n\n\nVenue: The Triple room in Navet\, BMC\, SciLifeLab meeting place in Uppsala. Entrance C11\, Husargatan 3. \n\n\n\nRegistration\n\n\n\nThis is a joint event hosted by Oxford Nanopore Technologies\, National Genomics Infrastructure (NGI)\, Clinical Genomics Uppsala and Clinical Genomics Stockholm. \n\n\n\n \n\n\n\nNanopore_flyer_6bDownload\n\n\n\n\n\n\n\n\n\n\n\nProgram\n\n\n\n12:00-13:00Light lunch provided by Oxford Nanopore13:00-13:05Welcome13:05-13:25Presentation of National Genomics Infrastructure (NGI) and Clinical Genomics13:25-13:45Information from Oxford Nanopore13:45-14:00Short Break14:00-14:20Rapid diagnostics in acute myeloid leukemia\, Rebecka Östlund\, Uppsala University14:20-14:40Long-read genome sequencing enhances diagnostics of pedriatic neurological disorders\, Marlene Ek\, Karolinska Institutet\, Karolinska University Hospital14:40-15:10Coffee break15:10-15:30Development of STEEL-seq for analysis of single-stranded DNA breaks\, Ola Söderberg\, Uppsala University15:30-15:50A reference genome assembly and insights to male fertility in Arctic charr using ONT\, Christos Palaiokostas\, Swedish University of Agricultural Sciences15:50-16:10Long-read metagenomics in the clinical context\, René Kaden\, Uppsala University\, Uppsala University Hospital16:10-16:15Closing remarks
URL:https://www.scilifelab.se/event/explore-the-future-of-genomics-with-oxford-nanopore/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2025/10/Navet-Uppsala-entrance-scaled.jpg
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251105T100000
DTEND;TZID=Europe/Stockholm:20251105T110000
DTSTAMP:20260408T051404
CREATED:20250922T082246Z
LAST-MODIFIED:20250923T075718Z
UID:10001619-1762336800-1762340400@www.scilifelab.se
SUMMARY:From repurposing anti-parasitic drug to prodrugs towards cancer and lupus treatments
DESCRIPTION:Welcome to this DDD exit seminar\, hosted by the DDD platform in Navet\, Uppsala.  \n\n\n\nPlease register below for either on site or online attendance. \n\n\n\nRegistration\n\n\n\nSpeakers\n\n\n\nPeter Nygren is a senior physician in oncology\, specializing in gastrointestinal cancer\, at Akademiska hospital and a professor of oncology at the Department of Immunology\, Genetics and Pathology\, Uppsala University since 2005. Peter’s research focuses on the development and validation of treatment predictive tests\, the development of new cancer drugs and the improvement of the treatment of gastrointestinal cancer\, including through dietary interventions. \n\n\n\nMårten Fryknäs is an Associate Professor and Senior Lecturer in Experimental Clinical Pharmacology at the Department of Medical Sciences\, Uppsala University. His research focuses on the development of cell-based assays\, drug screening\, and mechanism deconvolution in two- and three-dimensional models. The overall aim is to identify new approaches for the pharmacological treatment of cancer. \n\n\n\nRolf Larsson has been a professor and senior physician in clinical pharmacology at the Department of Medical Sciences\, Uppsala University since 2000. Rolf Larsson’s research focus is cancer pharmacology\, where the identification and development of new cancer drugs is a main focus. “Repurposing” of already existing drugs for use in cancer treatment is another area of ​​interest. \n\n\n\nAbstract\n\n\n\nScientific breakthroughs sometimes arise from unexpected observations. In our case\, it was a seemingly random discovery: that the established antiparasitic drug mebendazole also had significant effects against cancer and autoimmune disease. This observation became the starting point for a research program supported by SciLifeLab Drug Discovery and Development\, which we hope will open up new therapeutic strategies. \n\n\n\nHowever\, a key problem was the pharmacokinetic limitations of mebendazole\, which had long hampered the ability to exploit its full potential. To address this\, a prodrug was developed with the aim of improving the bioavailability and the pharmacodynamic profile. In parallel\, systematic work was carried out to clarify the molecular mechanism of action that had long eluded us and which required both methodological innovations and interdisciplinary approaches to solve.After several years of study\, we were finally able to identify a mechanism that explains the observed effects and thus sheds light on new biological links between mebendazole and key disease processes. The results not only provide a new understanding of how the substance works\, but also point to the possibility of developing a whole new class of therapeutics. \n\n\n\nAt our DDD-exit seminar\, we will present the scientific journey from random observation to mechanistic explanation and discuss the implications our findings may have for the future treatment of cancer and autoimmune diseases. \n\n\n\n\n\n\n\nHost: Ylva Gravenfors ylva.gravenfors@scilifelab.se and SciLifeLab Drug Discovery and Development Platform
URL:https://www.scilifelab.se/event/from-repurposing-to-prodrugs-from-parasite-towards-cancer-and-lupus-treatment/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251105T150000
DTEND;TZID=Europe/Stockholm:20251105T160000
DTSTAMP:20260408T051404
CREATED:20251022T094924Z
LAST-MODIFIED:20251022T094926Z
UID:10001640-1762354800-1762358400@www.scilifelab.se
SUMMARY:Nucleolar dysfunction: understanding its significance in human diseases
DESCRIPTION:Welcome to a seminar with Dr. Dorthe Payne-Larsen\, Danish Cancer Society Copenhagen\, Nucleolar Stress Disease Group. We will meet up with individuals who do not have access to SciLifeLab in the reception at 14.50. \n\n\n\nSpeaker\n\n\n\nDr. Dorthe Payne-Larsen\, Danish Cancer Society Copenhagen\, Nucleolar Stress Disease Group \n\n\n\nHost\n\n\n\nPer Moberg\, MBB
URL:https://www.scilifelab.se/event/nucleolar-dysfunction-understanding-its-significance-in-human-diseases/
LOCATION:Gamma 2 Lunchroom\, SciLifeLab\, Tomtebodavägen 23\, Solna\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251106T090000
DTEND;TZID=Europe/Stockholm:20251106T103000
DTSTAMP:20260408T051404
CREATED:20250812T103959Z
LAST-MODIFIED:20250929T062944Z
UID:10001578-1762419600-1762425000@www.scilifelab.se
SUMMARY:User meeting for your multi-modal research projects
DESCRIPTION:Boost your research — Book a private SciLifeLab planning and feedback session for your multi-modal research projects! \n\n\n\n \n\n\n\nRegister here\n\n\n\nOnce we have received your registration\, you will be seny the link to the online meeting. \n\n\n\nDate: November 6\, 9.00 – 10.30 Registration deadline: October 31 \n\n\n\nMultimodal molecular profiling and novel computational methods are transforming life science research\, but also pose new challenges in study design\, project resource planning and data management. SciLifeLab is a national resource of unique technologies and expertise available to life scientists\, in areas such as biomedicine\, ecology and evolution\, aiming to bring scientists together across traditional boundaries and foster collaborations with industry\, health care\, public research organizations and international partners. \n\n\n\nThe first Thursday of every month at 9.00 (except July and August)\, SciLifeLab offers an opportunity to jointly meet with representatives across the SciLifeLab service platforms\, to get feedback and help to plan\, design\, and refine new or ongoing multimodal research projects. Your project plans are discussed privately and remain confidential\, and information will not be shared outside of the service platforms. Note that for most studies\, follow-up meetings will be needed\, but our aim for these meetings is to provide an easy-access entry point for an overarching planning of multimodal studies. \n\n\n\nFor studies focusing on a single technology only\, please primarily contact our service platforms directly as described at the SciLifeLab homepage. \n\n\n\nTo make the best out of the allotted time\, we ask you to provide some background information about your project\, to help us ensure that the relevant experts are available to discuss your study.
URL:https://www.scilifelab.se/event/user-meeting-for-your-multi-modal-research-projects-2/
LOCATION:virtual event
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2025/08/AdobeStock_1081766437-scaled.jpeg
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251106T120000
DTEND;TZID=Europe/Stockholm:20251106T130000
DTSTAMP:20260408T051404
CREATED:20251026T150539Z
LAST-MODIFIED:20251118T103626Z
UID:10001646-1762430400-1762434000@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series: Taras Sych
DESCRIPTION:Welcome to join the Campus Solna Seminar Series – an initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between within Campus Solna. The format consists of two 20 min talks (One speaker from the Alpha-building and one from the Gamma-building respectively)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 12:00-13:00. You can bring your lunch to the seminar. \n\n\n\nPhD students that are attending the Campus Solna Seminar lectures will have the opportunity to gain credits. For the syllabus and instructions on how to obtain these credits\, read this document. Please contact your own department at your host University to confirm.See here the full schedule for this semester. \n\n\n\nThis week:\n\n\n\n\n\n\n\n\n\n\n \n\n\n\n \n\n\n\n\n\nTaras Sych\n\n\n\nErdinc Sezgin – gamma 3 \n\n\n\nMembrane fluidity of nanosized biopartilces as metabolic disease biomarker \n\n\n\n\n\n\nThis seminar series is organized by the PhD & Postdoc Council. For more information about the Council and other events check our page.
URL:https://www.scilifelab.se/event/campus-solna-seminar-series-john-cognetti-taras-sych/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Community
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/12/IMG_4110-scaled.jpg
ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251107T110000
DTEND;TZID=Europe/Stockholm:20251107T120000
DTSTAMP:20260408T051404
CREATED:20250926T124538Z
LAST-MODIFIED:20251021T134424Z
UID:10001621-1762513200-1762516800@www.scilifelab.se
SUMMARY:Exploring long-read WGS in a clinical setting of Pediatric brain tumors
DESCRIPTION:Clinical Genomics Webinar Series\n\n\n\nClinical Genomics Gothenburg is hosting this webinar as part of the Clinical Genomics Platform webinar series  \n\n\n\n \n\n\n\n\nJoin us on Zoom\n\n\n\n\nThe webinar will cover whole genome and whole transcriptome sequencing (WGS and WTS) analysis of childhood tumors in a clinical setting. Moreover\, the seminar will cover specific research interest regarding fusion genes in childhood brain tumors and preliminary data from an ongoing study comparing long-read (ONT sequencing) to short-read WGS sequencing will be presented. \n\n\n\n \n\n\n\nEveryone is welcome so feel free to spread the details with anyone who may be interested. Hope to see you there! \n\n\n\nHost: Marcela Dávila\, Head of Unit at Clinical Genomics Gothenburg \n\n\n\nInvited speaker: Assoc. Prof. Frida Abel\, University of Gothenburg
URL:https://www.scilifelab.se/event/pediatric-brain-tumors-exploring-long-read-wgs-in-a-clinical-setting/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2025/05/Clinical-Genomics-Webinar-series.jpg
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251110T090000
DTEND;TZID=Europe/Stockholm:20251110T170000
DTSTAMP:20260408T051404
CREATED:20250528T133817Z
LAST-MODIFIED:20251107T140700Z
UID:10001560-1762765200-1762794000@www.scilifelab.se
SUMMARY:SciLifeLab Epigenomics Symposium
DESCRIPTION:Epigenomics is a cornerstone of modern genomics\, providing crucial insights into gene regulation and cellular function. The study of epigenetic modifications\, such as DNA methylation\, histone modifications\, and non-coding RNA expression\, has revolutionized our understanding of gene activity across diverse biological systems. With advancements in sequencing technologies\, researchers can now investigate these modifications at a genome-wide level\, both in bulk tissues and at single-cell resolution. When integrated with genomic and transcriptomic data in a multimodal framework\, epigenomics offers new perspectives on gene expression regulation with broad applications in ecology\, developmental biology\, and human health\, including cancer and other diseases. \n\n\n\nWelcome to a full-day symposium with presentations from leading experts in the epigenomics field. \n\n\n\nThis event is organized in collaboration with NGI\, Clinical Genomics and NBIS. \n\n\n\nRegistration\n\n\n\nThe registration is closed. \n\n\n\n\nExtra! Hands-on Course in Epigenomics\n\n\n\nFollowing the symposium\, a four-day hands-on course will be held November 11- 14. The course combines laboratory work\, theory\, and bioinformatics training\, focused on the generation and analysis of DNA methylation data. Please visit the course page for more information and registration. \n\n\n\nRead more\n\n\n\n\nConfirmed speakers SciLifeLab Epigenomics Symposium\n\n\n\n\nPhilipp Euskirchen\, Charité – Universitätsmedizin Berlin\n\n\n\nMartí Duran-Ferrer\, FRCB-IDIBAPS\, Barcelona\n\n\n\nReka Toth\, Luxembourg Institute of Health\n\n\n\nMaja Jagodic\, Karolinska Institutet\n\n\n\nAngelica Maria Delgado-Vega\, Karolinska Institutet\n\n\n\nSofie Degerman\, Umeå University\n\n\n\nColum Walsh\, Linköping University\n\n\n\nLeif Andersson\, Uppsala University\n\n\n\nCarl-Johan Rubin\, Uppsala University\n\n\n\nAmanda Raine\, Uppsala University\n\n\n\nKatarzyna Dziasek\, SLU\n\n\n\n\nProgram\n\n\n\nSciLifeLab Epigenomics Symposium Agenda_251107Download\n\n\n\nContact for questions\n\n\n\nUlrika Liljedahl\, Ulrika.Liljedahl@medsci.uu.se \n\n\n\nOrganizers\n\n\n\nSciLifeLab Genomics NGI\, Jessica Nordlund https://www.scilifelab.se/units/ngi/ \n\n\n\nSciLifeLab Clinical Genomics\, Colum Walsh https://www.scilifelab.se/units/clinical-genomics/ \n\n\n\nNational Bioinformatics Infrastructure\, Louella Vasquez https://www.scilifelab.se/units/nbis/ \n\n\n\n\n\n\n\nWith the kind support from:
URL:https://www.scilifelab.se/event/scilifelab-epigenomics-symposium/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
ORGANIZER;CN="National Genomics Infrastructure (NGI)":MAILTO:support@ngisweden.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251110T133000
DTEND;TZID=Europe/Stockholm:20251110T140000
DTSTAMP:20260408T051404
CREATED:20251022T105523Z
LAST-MODIFIED:20251022T111011Z
UID:10001641-1762781400-1762783200@www.scilifelab.se
SUMMARY:BiG Talk – Best practices and common pitfalls in methylome sequencing analysis
DESCRIPTION:Abstract\n\n\n\nWhole-genome methylation sequencing provides single-base resolution of DNA methylation but remains one of the most computationally challenging omics data types to process. Its complexity stems from bisulfite-induced sequence conversion\, protocol-specific artifacts\, and the large number of available software tools\, making reproducible analysis and cross-study integration particularly difficult. To address this we systematically benchmarked ten complete computational workflows across five distinct profiling protocols using an experimental gold-standard reference. The results reveal substantial performance differences in accuracy\, computational efficiency\, and downstream analysis\, particularly for low-input samples. Furthermore\, we introduced a continuous\, “living” benchmarking platform for future software developments. To further facilitate large-scale\, standardized methylome analysis\, we developed complementary R package for efficient storage\, manipulation\, and integration of genome-wide methylation data that also supports applications such as methylation-based clocks\, or reference-based cell-type deconvolution enabling tissue composition inference from whole-genome methylomes. Together\, these resources address the difficulties of processing\, analyzing\, and interpreting DNA methylation data at genomic scale to ease reproducible epigenome research. \n\n\n\nBiography\n\n\n\nReka Toth is a computational biologist and group leader at the Luxembourg Institute of Health (LIH). She heads the Multi-omics Data Analysis Group in the Department of Cancer Research and drives omics initiatives within the Medical Informatics\, Bioinformatics & AI Unit. Trained as a molecular biologist\, she completed a PhD in genetic epidemiology at the University of Debrecen (Hungary) focused on chronic diseases and addiction\, and later added Software Engineering to pivot into computational biology. \n\n\n\nIn 2013\, Dr. Toth joined the National Center for Tumor Diseases in Heidelberg\, where she led the Biostatistics and Bioinformatics Group on colorectal cancer. She then moved to the Epigenomics Division at the German Cancer Research Center (DKFZ)\, expanding her work in computational epigenomics across cancer types\, with a particular emphasis on DNA methylation for prognosis and cell-of-origin. She joined LIH in 2021 and established her own group in 2025. Her research focuses on methylation as a diagnostic and prognostic biomarker and on integrative multi-omics to reveal complex biomarker signatures and mechanisms in cancer. \n\n\n\nHost: Louella Vasquez\, NBIS (louella.vasquez@scilifelab.se) \n\n\n\nBroadcast link (live event):  https://lu-se.zoom.us/j/62767371752 \n\n\n\nThe talk is sponsored by the SciLifeLab Epigenomics Symposium. \n\n\n\nA recording  will also be available on the NBIS YouTube channel.
URL:https://www.scilifelab.se/event/big-talk-best-practices-and-common-pitfalls-in-methylome-sequencing-analysis/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="BiG Talks":MAILTO:info@nbis.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251111T090000
DTEND;TZID=Europe/Stockholm:20251111T100000
DTSTAMP:20260408T051404
CREATED:20251104T163529Z
LAST-MODIFIED:20251104T163531Z
UID:10001659-1762851600-1762855200@www.scilifelab.se
SUMMARY:Epigenetic Diagnostic Classification of Cancer
DESCRIPTION:Use of DNA methylation to improve diagnosis of tumors in the clinical setting \n\n\n\n\n\nClinical Genomics Webinar Series\n\n\n\nClinical Genomics Linköping is hosting this webinar as part of the Clinical Genomics Platform webinar series \n\n\n\n \n\n\n\n\nJoin us on Zoom\n\n\n\n\nThere is increasing interest in using DNA methylation information from long-read sequencing to improve the classification of tumors\, which has implications for surgical approach and treatment options. At Clinical Genomics Linköping we are exploring use of the NanoDx pipeline for classification of CNS tumors in collaboration with Dr. Eukirchen\, who developed and implemented it in Berlin. We will present some background to the method\, use on frozen tissue and liquid biopsy\, as well as some user cases from both sites.  \n\n\n\n \n\n\n\nEveryone is welcome so feel free to spread the details with anyone who may be interested. Hope to see you there! \n\n\n\nHost: Colum Walsh\, Platform site director at Clinical Genomics Linköping \n\n\n\nInvited speakers: Dr. Philipp Euskirchen\, Charité University Hospital\, Berlin and Dr. Małgorzata Łysiak\, Clinical Genomics Linköping\, Linköping University
URL:https://www.scilifelab.se/event/epigenetic-diagnostic-classification-of-cancer/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2025/05/Clinical-Genomics-Webinar-series.jpg
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20251111T100000
DTEND;TZID=Europe/Stockholm:20251111T113000
DTSTAMP:20260408T051404
CREATED:20251003T103235Z
LAST-MODIFIED:20251003T103236Z
UID:10001624-1762855200-1762860600@www.scilifelab.se
SUMMARY:Getting Started with Berzelius: Essential Commands
DESCRIPTION:Welcome to join this practical introduction to essential commands on Berzelius. The session will cover: \n\n\n\n\nLogging in\n\n\n\nManaging data\n\n\n\nSetting up environments\n\n\n\nRunning and monitoring jobs\n\n\n\n\nParticipants will also gain hands-on experience with these commands. By the end of the session\, you will be able to navigate Berzelius confidently and use its resources effectively for your research.  \n\n\n\nDate: Tuesday\, November 11\, 2025Time: 10:00–11:30 \n\n\n\nTarget audience: The online event is open for all current and prospective Berzelius users. Please read the eligibility requirements for accessing Berzelius.Place: Online via Zoom (link provided upon registration) \n\n\n\n\nRegistration\n\n\n\n\nPreliminary Agenda \n\n\n\nTimeSession TitleSpeaker(s)10:00–11:00Getting Started with Berzelius: Essential CommandsXuan Gu11:00–11:30Open Q&A SessionBerzelius Application Expert\n\n\n\nThis event is a collaboration between National Supercomputer Centre (NSC) at Linköping University and SciLifeLab Data Centre. \n\n\n\nFor questions please contact xuan.gu@liu.se  (Xuan Gu)
URL:https://www.scilifelab.se/event/getting-started-with-berzelius-essential-commands/
LOCATION:Zoom
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2025/10/NSC-Berzelius-LiU-2025-3451-Photographer-Magnus-Johansson.jpg
END:VEVENT
END:VCALENDAR