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BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211130T103000
DTEND;TZID=Europe/Stockholm:20211201T150000
DTSTAMP:20260403T213310
CREATED:20210819T073949Z
LAST-MODIFIED:20211109T082852Z
UID:10000408-1638268200-1638370800@www.scilifelab.se
SUMMARY:Swedish Microfluidics in Life Science 2021
DESCRIPTION:The Swedish Microfluidics in Life Science meeting gathers researchers in the field of micro- and nanofluidics. The meeting offers an opportunity to present your research\, to network with researchers at Swedish universities\, institutes and companies \, and to listen to invited talks by a panel of well reputed research leaders. Confirmed speakers are Stefan Löfås (Innovido AB)\, Edith Hammer (Lund University)\, Christoph Merten (Ecole Polytechnique Fédérale de Lausanne)\, Anja Boisen (‎Technical University of Denmark) and Madhavi Krishnan (University of Oxford) \n\n\n\nSave the date and please help spread this information in your groups and local networks. \n\n\n\nRead more
URL:https://www.scilifelab.se/event/swedish-microfluidics-in-life-science-2021/
LOCATION:Lund University\, Lund\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Swedish Microfluidics in Life Sciences":MAILTO:per.augustsson@bme.lth.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211130T110000
DTEND;TZID=Europe/Stockholm:20211130T115000
DTSTAMP:20260403T213310
CREATED:20211110T155846Z
LAST-MODIFIED:20211130T070356Z
UID:10000487-1638270000-1638273000@www.scilifelab.se
SUMMARY:Uppsala PhD&Postdoc seminars: Weifeng Lin & Liza Löf
DESCRIPTION:Welcome to SciLifeLab Uppsala PhD&Postdoc seminars!We are very happy to host exciting talks by PhD students and Postdocs from a great variety of fields within SciLifeLab.The seminars will take online place every Tuesday from 11:00 to 11:50 \n\n\n\n\n\n\n\n\n\nFor this occasion the seminars will be: Weifeng Lin\, PhD student in Globisch labTitle: Unique chemoselective probes for discovery and investigation of metabolites in human samples with enhanced mass spectrometric sensitivityLiza Löf\, Postdoc in Landegren Lab (Molecular Tools)Title: Development of methods to characterize the impact on signaling pathways by targeted therapy in chronic myeloid leukemia \n\n\n\nLink to seminar
URL:https://www.scilifelab.se/event/uppsala-phdpostdoc-seminars-weifeng-lin-liza-lof/
LOCATION:Online event via Zoom
CATEGORIES:Community
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211201T151500
DTEND;TZID=Europe/Stockholm:20211201T164500
DTSTAMP:20260403T213310
CREATED:20211104T130608Z
LAST-MODIFIED:20211119T151648Z
UID:10000481-1638371700-1638377100@www.scilifelab.se
SUMMARY:SciLifeLab COVID-19 seminars: Ralf Bartenschlager and Kristian Sandberg
DESCRIPTION:Topic: Drug screening and emerging viruses \n\n\n\nThe last of the five SciLifeLab COVID-19 seminars this autumn starts with Ralf Bartenschlager\, Professor\, Department of Infectious Diseases\, Molecular Virology\, Heidelberg University & Virus-associated Carcinogenesis\, German Cancer Research Center\, Heidelberg\, talking about Architecture and biogenesis of ER-derived viral replication organelles.Kristian Sandberg\, PhD\, Associate Professor.\, and SciLifeLab Drug Discovery and Development Platform Co-Director at Uppsala University\, then continues the seminar with his talk on Establishing a drug discovery platform for corona virus disease at SciLifeLab \n\n\n\nModerator: Marianna Tampere\, KI \n\n\n\n\n\n\n\n \n\n\n\n Registration is mandatory to get the Zoom link for the event  \n\n\n\n\nREGISTRATION\n\n\n\nBIOS & ABSTRACTS
URL:https://www.scilifelab.se/event/scilifelab-covid-19-seminars-ralf-bartenschlager-and-kristian-sandberg/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211202T130000
DTEND;TZID=Europe/Stockholm:20211202T140000
DTSTAMP:20260403T213310
CREATED:20210903T122753Z
LAST-MODIFIED:20211115T144616Z
UID:10000435-1638450000-1638453600@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series: Tojo James and Karl Olofsson
DESCRIPTION:Welcome to join the Campus Solna Seminar Series – an  initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between within Campus Solna. The format consists of two 15 min talks (One speaker from the Alpha-building and one from the Gamma-building respectively)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 13:00-13:50 and following current regulations\, they will be broadcast via zoom. \n\n\n\n \n\n\n\nThis week\n\n\n\nSingle-cell transcriptional changes associated with drug response in AMLTojo James (Päivi Östling\, alpha 4)  \n\n\n\n \n\n\n\nMulticellular tutor diskoids: A 3D cell culture geometry optimised for microscopyKarl Olofsson (Martin Viklund\, gamma 3) \n\n\n\nRegistration\n\n\n\nRegister to receive the zoom-link. The same zoom link applies for all Campus Solna Seminar Series\, i.e. only one registration is necessary.
URL:https://www.scilifelab.se/event/campus-solna-seminar-series-tojo-james-and-karl-olofsson/
CATEGORIES:Community
ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211203T100000
DTEND;TZID=Europe/Stockholm:20211203T150000
DTSTAMP:20260403T213310
CREATED:20211130T143531Z
LAST-MODIFIED:20211202T174958Z
UID:10000493-1638525600-1638543600@www.scilifelab.se
SUMMARY:MTLS Alumni Network Speaker Day
DESCRIPTION:The joint master’s programme in Molecular Techniques in Life Science fosters graduates for a professional research career in life science. It has a strong focus on molecular techniques for disease therapies and diagnostic tools\, coupled with substantial training in data analysis (bioinformatics and programming). The programme is a collaboration between Karolinska Institutet\, KTH and Stockholm University at the Science for Life Laboratory in Stockholm\, offering students the unique opportunity to study at all three institutions. \n\n\n\nFacts \n\n\n\nDate: Friday\, December 3rdTime: 10:00-15:00Location: Widerströmska Huset\, KI Campus Solna (Next to Scilifelab)\n\n\n\nWe are looking forward to welcoming alumni from Academia\, Industry\, and other science fields to this event\, where they will share their wisdom and experience with current students. \n\n\n\nAgenda:10:00-12:00 Session 112:00-13:00 Lunchbreak and Mingle13:00-15:00 Session 2 \n\n\n\nWe will announce the speaker list closer to the event. \n\n\n\n \n\n\n\nLearn more about the master’s programme here.
URL:https://www.scilifelab.se/event/mtls-alumni-network-speaker-day/
LOCATION:Widerströmska Huset\, Tomtebodavägen 18\, Solna\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211206T163000
DTEND;TZID=Europe/Stockholm:20211208T183000
DTSTAMP:20260403T213310
CREATED:20211201T120144Z
LAST-MODIFIED:20220104T121710Z
UID:10000494-1638808200-1638988200@www.scilifelab.se
SUMMARY:DDLS fellow candidates' seminars at Linköping University
DESCRIPTION:Welcome to listen to the seminars and discussions of the candidates for DDLS fellow position in I) Cell and Molecular Biology and in II) Precision Medicine and Diagnostics at Linköping University. The SciLifeLab and Wallenberg National Program for Data-Driven Life Science (DDLS) is a 12-year initiative funded with a total of 3.1 billion SEK from the KAW. \n\n\n\nRead more
URL:https://www.scilifelab.se/event/ddls-fellow-position-in-cell-and-molecular-biology-and-in-precision-medicine-and-diagnostics/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211207T090000
DTEND;TZID=Europe/Stockholm:20211207T110000
DTSTAMP:20260403T213310
CREATED:20210902T061020Z
LAST-MODIFIED:20211005T085331Z
UID:10000426-1638867600-1638874800@www.scilifelab.se
SUMMARY:BioImage Informatics Call4Help
DESCRIPTION:Every 1st week of the month (mainly on Tuesdays\, but there might be exceptions) the BioImage Informatics Facility together with microscopy expert Sylvie Le Guyader (LCI\, Karolinska Institutet) organizes a Call4Help session. The aim is to offer combined expertise towards microscopy and bioimage analysis. All researchers from Swedish institutes can participate. \n\n\n\nThe ideal timepoint to join the Call4Help session is when a researcher has performed pilot experiments and has tried out first analysis approaches – but before having recorded hundreds of images. Combining BIIF’s expertise in BioImage Analysis with microscopy expertise we can discuss ways to record the images that allow analysis afterwards. We will discuss different analysis approaches using mainly open-source software (Fiji\, CellProfiler\, QuPath\, Ilastik\, KNIME)\, but also commercial systems\, if needed (Imaris). \n\n\n\nThe Call4Help session format has been introduced to the BioImage Analysis community by NEUBIAS and ScopeM. \n\n\n\nHow to participate? \n\n\n\nWe prefer if you prepare a short presentation and upload it together with some example images according to the steps 1 and 2 below. This makes it easier for us when we have to prioritize between projects and allows us to prepare for the meeting. But if time permits\, we can also accept participants without this info. \n\n\n\nStep1: \n\n\n\nPrepare a short presentation (5-7 min)  – use the following template for your presentation: \n\n\n\nhttp://bit.ly/BIIF_C4H_slideTemplate \n\n\n\nSlide template by NEUBIAS/ScopeM \n\n\n\nStep2: \n\n\n\na) Upload your presentation \n\n\n\nUpload your presentation to a drive of your choice. You can also use our Call4Help google drive. Note that files shared on our Call4Help drive will be available to everyone until the session is over. \n\n\n\nhttp://bit.ly/BIIF_C4H_Drive \n\n\n\nb) Upload example images for testing. \n\n\n\nUpload example images for testing either to the drive of your choice or our Call4Help google drive above. \n\n\n\nhttp://bit.ly/BIIF_C4H_Drive \n\n\n\n \n\n\n\nc) Register by filling out the registration form: \n\n\n\nhttp://bit.ly/BIIF_C4H_Registration \n\n\n\nStep 3: \n\n\n\nJoin the zoom-session. \n\n\n\nIf your problem is selected for presentation\, you will get a time-slot of 30 – 60 minutes within the session. \n\n\n\nWhat are the Deadlines \n\n\n\nSubmission of a problem and upload of example data: Friday the week before the session. \n\n\n\nNotification about participation: The day before the session. \n\n\n\nNext Call4Help session \n\n\n\nTuesday\, December 7\, 2021\, 9.00-12.00. Deadline for application: Friday\, December 3\, 2021.
URL:https://www.scilifelab.se/event/bioimage-informatics-call4help-6/
CATEGORIES:Event
ORGANIZER;CN="Bioimage Informatics Unit":MAILTO:biif@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211207T130000
DTEND;TZID=Europe/Stockholm:20211207T150000
DTSTAMP:20260403T213310
CREATED:20211118T134208Z
LAST-MODIFIED:20211201T145409Z
UID:10000490-1638882000-1638889200@www.scilifelab.se
SUMMARY:Affinity proteomics Uppsala present a seminar about the latest developments of the in situ proximity ligation assay
DESCRIPTION:Topic: Navinci in Situ Proximity ligation assay\, new developments\, applications\, and user presentations. \n\n\n\nSciLifeLab Affinity Proteomics Uppsala offer full service of in situ proximity ligation assays (PLA) in fixed cells or tissue sections to image\, with enhanced specificity\, the presence of specific proteins\, interactions and/or post-translational modifications to e.g. characterise acts of protein signaling in tumor tissues\, or to evaluate effects of drug treatment. Our latest addition is the PLA technology offered by Navinci and we would like to present this technology together with research presentations by users in a hybrid event (in-person and online). After the event there will be time for questions and refreshments at Mötestorget in Navet. \n\n\n\nWelcome! \n\n\n\n \n\n\n\n\n\n\n\nRegister here\n\n\n\n\n\n\n\nAgenda\n\n\n\nSeminar 13:00 – 15:00\, SciLifeLab\, Trippelrummet and Zoom \n\n\n\n13:00 Welcome and introduction (Mikael Åberg\, SciLifeLab Affinity Proteomics and Robert Gunnarsson\, Navinci) \n\n\n\n13:15 Agata Zieba Wicher\, Navinci: Introduction to Navinci technology \n\n\n\n13:40 Amanda Lindberg\, Uppsala University: Detection of activated PDGFRb receptor in NSCLC using NaveniFlex combined with a TSA-based detection method  \n\n\n\n14:00 Nicolle Heinzl\, Oncolabs 14:00 Nicolle Heinzl\, Oncolabs: “p53 prions” – A new promising cancer biomarker meets a disruptive technology \n\n\n\n14:20 Johan Heldin\, Uppsala University: Differential impact of lipid raft depletion on platelet-derived growth factor (PDGF)-induced ERK1/2 MAP-kinase and AKT signaling \n\n\n\n14:40 Brian Perrino\, University of Nevada : TBD \n\n\n\n15:00 – 17:00 Mingle with bubbles and canapés and open house with a vernissage at Navinci\, SciLifeLab Navet\, Mötestorget/ Navinci facilities 
URL:https://www.scilifelab.se/event/navinci-scilifelab-collaboration-seminar-navinci-open-house-and-vernissage/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211208T093000
DTEND;TZID=Europe/Stockholm:20211208T150000
DTSTAMP:20260403T213310
CREATED:20211103T133810Z
LAST-MODIFIED:20211208T062219Z
UID:10000479-1638955800-1638975600@www.scilifelab.se
SUMMARY:Symposium: Science & SciLifeLab Prize for Young Scientists
DESCRIPTION:SciLifeLab and AAAS/Science magazine have joined forces in creating the Science & SciLifeLab Prize for Young Scientists to promote young scientists early in their careers. The Prize is awarded annually to four recent Ph.D. graduates for outstanding life science research.  \n\n\n\nJoin us\, to celebrate the 2020 and 2021 winners of the Science & SciLifeLab Prize for Young Scientists at the Scientific Symposium\, December 8\, 09:30-15:00.  \n\n\n\nThe bus from Tomtebodavägen 23 to Humanistiska Teatern departs at 07:45 and from Uppsala to Solna at 15:15. \n\n\n\nHybrid event\n\n\n\nOn-site\, Humanistiska Teatern\, Uppsala: The Symposium will include the Prize winner’s presentations\, a keynote lecture\, lunch\, and coffee with the possibility to meet and mingle with the winners and your SciLifeLab colleagues. Many people are interested in meeting IRL again but the seats are limited (100p). Register today! First-comes first served! Please cancel if you can’t come so that the spot can be available for someone else. We have bus transportation from Tomtebodavägen 23 at 07:45. \n\n\n\nWe need you to register for the on-site event by November 30\, at the latest for catering reasons. The registration will be open until we reach the maximum participants (100p)\, but we cannot guarantee lunch or coffee after November 30. If you have questions\, please contact events@scilifelab.se. \n\n\n\nRegistration\n\n\n\nProgram\n\n\n\nRemote: The event will be broadcasted on the SciLifeLab YouTube channel. You don’t have to register for the YouTube broadcast. But if you do\, you will get a reminder and a direct link to the event. Don’t miss this scientific symposium where you will meet the 2020 and 2021 year´s laureates and hear about their award-winning research.  \n\n\n\n \n\n\n\nThe Prize is awarded in the following categories: \n\n\n\n\n\nCell and Molecular BiologyResearch in this category includes cellular and molecular processes at levels ranging from single molecule to single cell to tissue and organ systems.Genomics\, Proteomics and Systems BiologyResearch in this category focuses on genomics\, proteomics\, integrative omics and systems biology approaches to facilitate comprehensive understanding of living cells\, organisms and species.Ecology and EnvironmentResearch in this category encompasses interactions between organisms and their environment\, and how these processes are influenced by human activity.Molecular MedicineResearch in this category aims at building on the molecular understanding of disease in humans to develop preventive\, diagnostic and therapeutic approaches\, including individualized medicine.\n\n\n\n\n\n\n\n\n\nShort facts: \n\n\n\nDate: December 8\, 2021 \n\n\n\nTime: 09:30-15:00 \n\n\n\nVenue: Humanistiska teatern\, Engelska Parken\, Uppsala and streaming to SciLifeLab YouTube channel. \n\n\n\nRegistration deadline For lunch and coffee\, register by November 30\, at the latest. Limited seats on site\, unlimited participants online \n\n\n\n \n\n\n\nAbout the Prize\n\n\n\nScience/AAAS and SciLifeLab\, have joined forces in creating the Science & SciLifeLab Prize for Young Scientists. Both Science/AAAS and SciLifeLab recognize that global economic health is dependent upon a vibrant research community and we need to incent our best and brightest to continue in their chosen fields of research. Considering the difficult economic environment\, we feel it is important to provide extra encouragement to young scientists as they begin their scientific careers. Each year\, the grand prize winner will receive a prize of US$30\,000; each of the three category winners will receive US$10\,000. The grand prize winning essay will be published in Science and essays from the three category winners will be published online. The prize is jointly operated by Science and SciLifeLab and is generously sponsored by the Knut and Alice Wallenberg Foundation.  \n\n\n\nRead more about the prize here. \n\n\n\n\n\n\n\nWatch this video to hear from the 2020 Grand Prize Winner and Category Winners!\n\n\n\n\n\n\n\n\n\n\n\n\n\nAbout Science/AAAS\n\n\n\nThe American Association for the Advancement of Science (AAAS) is the world’s largest general scientific society\, and publisher of the journals\, Science\, Science Translational Medicine\, Science Signaling\, Science Advances\, Science Immunology\, and Science Robotics. AAAS was founded in 1848\, and includes some 254 affiliated societies and academies of science\, serving 10 million individuals. Science\, founded by Thomas Edison\, has the largest paid circulation of any peer-reviewed general science journal in the world\, with an estimated total readership of 570\,400. \n\n\n\nThe non-profit AAAS—www.aaas.org—is open to all and fulfills its mission to “advance science and serve society” through initiatives in science policy\, international programs\, science education\, and more. Science further participates in various efforts to provide free access for scientists in the world’s poorest countries. \n\n\n\nAbout SciLifeLab\n\n\n\nAs a national hub for molecular biosciences in Sweden\, SciLifeLab develops and maintains unique research infrastructure\, services and data resources for life science. SciLifeLab coordinates research communities in health and environmental science\, recruitment and training of young scientists\, and fosters collaboration with industry\, health care\, public research organizations and international partners. The overall aim of SciLifeLab is to facilitate cutting-edge\, multi-disciplinary life science research and promote its translation to the benefit of society. \n\n\n\nSciLifeLab is jointly operated by its four founder universities: KTH Royal Institute of Technology\, Karolinska Institutet\, Stockholm University and Uppsala University. About 200 research groups\, 1500 researchers and 40 national infrastructure units are associated with SciLifeLab. The two main research centers are located in Stockholm and Uppsala\, but national SciLifeLab units exist at all major Swedish universities.
URL:https://www.scilifelab.se/event/symposium-science-scilifelab-prize-for-young-scientists/
LOCATION:Humanities Theater\, Engelska parken\, Uppsala\, 75238\, Sweden
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2020/11/winner-photos-2020_270x170_prizepicture_black-scaled.jpg
ORGANIZER;CN="Science/AAAS and SciLifeLab":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211208T140000
DTEND;TZID=Europe/Stockholm:20211208T150000
DTSTAMP:20260403T213310
CREATED:20211124T131507Z
LAST-MODIFIED:20211206T105940Z
UID:10000491-1638972000-1638975600@www.scilifelab.se
SUMMARY:SciLifeLab Drug Discovery Seminar & DDD Exit event: Thomas Helleday
DESCRIPTION:Pharmacological targeting of MTHFD2 suppresses acute myeloid leukemia by inducing thymidine depletion and replication stress\n\n\n\n\n\n\n\nProfessor Thomas Helleday\, Karolinska Institutet \n\n\n\nSciLifeLab Drug Discovery Seminars\, hosted by the DDD platform\, is a series of educational lectures about recent developments\, technologies\, and trends in drug discovery and development that aims to enlighten\, and spark a discussion\, within the Swedish drug discovery community. \n\n\n\nAbstract \n\n\n\nThe folate metabolism enzyme MTHFD2 is consistently overexpressed in cancer but its roles are not fully characterized and current candidate inhibitors have limited potency for clinical development. Here we demonstrate a role for MTHFD2 in DNA replication and genomic stability in cancer cells\, and present optimised potent and selective nanomolar MTHFD2 inhibitors (MTHFD2i); protein co-crystal structures demonstrated binding to the active site of MTHFD2 and target engagement and that works in vitro and in vivo. \n\n\n\nThe results demonstrate a functional link between MTHFD2-dependent cancer metabolism and replication stress that can be exploited therapeutically with this new class of inhibitors. The work\, done in collaboration with the SciLifeLab DDD platform\, is accepted in the journal Nature Cancer and is the base for the creation of a new company: One-carbon therapeutics AB.  \n\n\n\nregistration
URL:https://www.scilifelab.se/event/scilifelab-drug-discovery-seminar-ddd-exit-event/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211209T090000
DTEND;TZID=Europe/Stockholm:20211209T160000
DTSTAMP:20260403T213310
CREATED:20211110T201313Z
LAST-MODIFIED:20211125T070823Z
UID:10000488-1639040400-1639065600@www.scilifelab.se
SUMMARY:FAIR principles in life science research practice 
DESCRIPTION:Location: Online via Zoom\n\n\n\nThis online workshop will showcase how to put the FAIR principles into practice and is specifically designed to cater to life science researchers at all career stages. It is organised by SciLifeLab Data Centre and NBIS and include international speakers\, presenters from the SciLifeLab community and optional hands-on exercises guided by experts from NBIS and SciLifeLab Data Centre.  \n\n\n\nThe workshop aims to highlight some of the strongest motivators for adopting the FAIR principles and demonstrate how to operationalise them in your projects’ data management practices. While the intended audience is the full spectrum of researchers from experienced principal investigators to early career PhDs the registration open to everyone involved in life science research. To serve participants with varying roles and priorities the day is divided into two companion sessions and you can sign up for one or both at your leisure. The morning session covers the principles and a selection of case studies on how to operationalise them. The afternoon session is based on practical exercises and will provide an opportunity to gain hands-on experience of making research data FAIR. \n\n\n\nThe overall issues that the sessions aim to address is the fact that an increasing number of policymakers and funders are expecting research projects to adopt the FAIR principles for scientific data management. While the acronym is composed of words that are commonly associated with assessing secondary data—that is that they are Findable\, Accessible\, Interoperable\, and Reusable—it might not be obvious how to prepare your data to be FAIR. \n\n\n\nAcceptance to this workshop is on a first come\, first served basis. Registration is required to receive the Zoom link. The afternoon session is limited to 20 participants. \n\n\n\nMorning session (09:00–12:00)\n\n\n\nInvited speakers include international experts on supporting research projects in adopting the FAIR principles and a selection of projects from the SciLifeLab community that illustrate aspects of putting FAIR in practice. \n\n\n\nErik Schultes – Lead FAIR Implementation at the GO FAIR Foundation and a member of the Leiden Center for Data Science.Rob Hooft – Technical Coordinator for the Dutch ELIXIR Node and Programme Manager Data Stewardship at the Dutch Techcentre for Life Sciences (DTL).\n\n\n\nAfternoon session (13:00-16:00)\n\n\n\nJoin the local data management experts from SciLifeLab’s national bioinformatics support platform (NBIS) and SciLifeLab Data Centre in guided\, hands-on exercises on data organisation\, reproducibility and good data management practices that you can apply in your own projects. \n\n\n\nRegister here\n\n\n\nView the full agenda here
URL:https://www.scilifelab.se/event/fair-principles-in-life-science-research-practice/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2020/09/cropped-SciLifeLab_symbol_green.png
ORGANIZER;CN="SciLifeLab Data Centre":MAILTO:datacentre@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211209T130000
DTEND;TZID=Europe/Stockholm:20211209T140000
DTSTAMP:20260403T213310
CREATED:20210903T122912Z
LAST-MODIFIED:20211125T055911Z
UID:10000436-1639054800-1639058400@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series: Gabriele Pozzati and Alex Petri
DESCRIPTION:Welcome to join the Campus Solna Seminar Series – an  initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between within Campus Solna. The format consists of two 15 min talks (One speaker from the Alpha-building and one from the Gamma-building respectively)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 13:00-13:50 and following current regulations\, they will be broadcast via zoom. \n\n\n\n \n\n\n\nThis week\n\n\n\nSimultaneous folding and docking: a new approach for modelling protein complexesGabriele Pozzati (Arne Elofsson\, alpha 6)  \n\n\n\n \n\n\n\nDe novo construction of Isoforms from Long-read data (isONform)Alex Petri (Kristoffer Sahlin\, gamma 6) \n\n\n\nRegistration\n\n\n\nRegister to receive the zoom-link. The same zoom link applies for all Campus Solna Seminar Series\, i.e. only one registration is necessary.
URL:https://www.scilifelab.se/event/campus-solna-seminar-series-gabriele-pozzati-and-alex-petri/
CATEGORIES:Community
ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211209T133000
DTEND;TZID=Europe/Stockholm:20211209T143000
DTSTAMP:20260403T213310
CREATED:20211207T081725Z
LAST-MODIFIED:20211207T083446Z
UID:10000498-1639056600-1639060200@www.scilifelab.se
SUMMARY:Validating antibodies for research applications
DESCRIPTION:Will Howat\, Senior director of Antibody Validation and Characterization at Abcam \n\n\n\nAbstract\n\n\n\nValidation of antibodies for use in scientific research is a tricky and time-consuming process which can stifle scientific progress. During this seminar\, I will demonstrate why we need validation and the tools that are available to help. \n\n\n\nBiography\n\n\n\nWill Howat leads Abcam’s approach to product validation and technical quality globally as Senior Director of Antibody Validation & Characterization. Prior to joining Abcam in 2018\, he worked at AstraZeneca as Team Leader of its Molecular Pathology Group\, where his team developed biomarker assays for preclinical\, Phase 1 and Phase 2 clinical trials. Before that he was at the Cancer Research UK’s Cambridge Institute\, where he set up and ran the Histopathology/ISH core facility for 9 years. He has also worked at the Wellcome Sanger Institute on the Atlas of Protein Expression and was responsible for R & D within the Immunohistochemistry group. \n\n\n\nWill has a BSc (Hons) in Immunology & Pharmacology from the University of Strathclyde and a PhD in Pathology from the University of Southampton. His publications span key journals such as The Lancet\, Nature\, Science\, Nature Genetics\, American Journal of Pathology\, and the Journal of Pathology. \n\n\n\nHosts\n\n\n\nFabio Socciarelli MD\, Henrik J. Johansson PhD
URL:https://www.scilifelab.se/event/validating-antibodies-for-research-applications/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211213T090000
DTEND;TZID=Europe/Stockholm:20211214T153000
DTSTAMP:20260403T213310
CREATED:20211104T100412Z
LAST-MODIFIED:20211210T140942Z
UID:10000480-1639386000-1639495800@www.scilifelab.se
SUMMARY:Cryo-EM 2021 user meeting  & Integrated Structural Biology user day
DESCRIPTION:The Integrated Structural Biology welcomes you to these two events. You can join either event – or both – and you can choose to participate online or on site in Air&Fire at SciLifeLab Campus Solna.  \n\n\n\nWe invite you to either or both of our events: \n\n\n\n3rd Cryo-EM Facility National Meeting – December 131st Integrated Structural Biology platform user meeting – December 14\n\n\n\n3rd Cryo-EM Facility National Meeting \n\n\n\nWelcome to join this meeting with users to discuss results and needs from the community. \n\n\n\nProgram – December 13 \n\n\n\n9.00News from the Cryo-EM facility nodes in Stockholm and Umeå10.00Fika10.20PReSTO for Cryo-EM\, Torben Rasmussen\, Linköping10.40Chameleon sample preparation for cryo-EM\,Sacha de Carlo\, SPT Labtech11:00Recent advances in the field of CryoEM Gaurav Sharma\, Thermo Fisher Scientific.11:20Structural proteomics for studying protein interactions and dynamicsSimon Ekström\, Lund University11:40Big and dynamic – An ancient and universal NMP kinaseTobias Sparrman12:00Lunch13:00Cryo-EM user discussion\, previous in-person meeting (drop-in service\, booking system\, cryoScreeeNET) and sensing the interest for potentiating new applications (electron diffraction\, FIB cryoET\, cryo-CLEM)15:00Wrap-up16:00End of Meeting\n\n\n\nRegister to attend this event\n\n\n\n\n\n\n\n1st Integrated Structural Biology platform user meeting \n\n\n\nThe purpose of this meeting is to show complementary techniques available at SciLifeLab Infrastructure and to encourage interactions. \n\n\n\nProgram – December 14 \n\n\n\n8:45General introduction to ISB platform9.00Presentation of Protein Production Sweden (PPS)Malin Bäckström9.15MicroED for structure determination of biomolecules\,  Laura Pacoste\, SU9.35NMR studies on VIM-2\, Hermina Wieske\, Uppsala University9.55Proteome-wide crosslinking mass spectrometry of host-pathogen interactions\, Lotta Happonen\, Lund University10.15Coffee Break11.00Structure and dynamics of the chromatin remodeler ALC1 bound to a PARylated nucleosome\, Luka Bacic\, Uppsala University11.20Structural basis of DegP-protease temperature-dependent activation\, Darius Šulskis\, University of Gothenburg11.40The interface study of M1-protein and M1-specific IgG via structural mass spectrometry\, TX-MS and HDX-MS\, Di Tang\, Lund University12.00Lunch13.00Cryo-EM structural study of the P5-type ATPases” Ping Li\, Kopenhagen University\, LU13.20Characterizing proteins in their native environment: Advances in in situ NMR\, Johannes Thoma\, University of Gothenburg13.40Unravelling the molecular basis of cell protection by Bcl-2 proteins\, Gerhard Gröbner\, Umeå University14.00Bruker on UF-MAS and structural biology14.30Discussion – user feed back15.20Final notes15:30End of Day\n\n\n\nRegister to attend this event
URL:https://www.scilifelab.se/event/cryo-em-and-isb-day-2021/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="Integrated Structural Biology Platform at SciLifeLab":MAILTO:cecilia.persson@nmr.gu.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211213T150000
DTEND;TZID=Europe/Stockholm:20211213T160000
DTSTAMP:20260403T213310
CREATED:20211209T160326Z
LAST-MODIFIED:20220330T154146Z
UID:10000500-1639407600-1639411200@www.scilifelab.se
SUMMARY:RNA Medicine\, the Next Frontier: Therapeutic Targeting of Non-Coding RNAs
DESCRIPTION:Anders NäärDepartment of Nutritional Sciences & Toxicology\, University of California\, Berkeley  \n\n\n\nBiography/Talk content\n\n\n\n\n\n\n\nAnders M. Näär is a Professor of Metabolic Biology in the Department of Nutritional Sciences & Toxicology at the University of California\, Berkeley. He was a postdoctoral research fellow with Robert Tjian at UC Berkeley/HHMI\, where he discovered the human Mediator transcriptional co-activator complex. Dr. Näär was a Professor in the Department of Cell Biology\, Harvard Medical School and the Massachusetts General Hospital Cancer Center. A major focus of his lab is to understand transcriptional and microRNA regulatory mechanisms controlling metabolic homeostasis to guide novel therapeutic strategies for the treatment of cardiovascular disease\, obesity\, Type 2 diabetes\, non-alcoholic fatty liver diseases (NAFLD/NASH)\, age-related macular degeneration (AMD)\, Duchenne muscular dystrophy (DMD)\, multi-drug resistant fungal infections\, and numerous types of cancer. His work resulted in a number of impactful studies\, patents and foundation of companies. In his talk\, Anders will broadcast his latest ventures in using RNA therapeutics in combating human diseases. \n\n\n\nDate: 13 December 2021Time: 3pm \n\n\n\nVenue (format hybrid): SciLifeLab\, lunchroom\, y2The ZOOM link is: https://ki-se.zoom.us/j/68353175106?pwd=bHZVYjFTMDR2YTN2ZzU1Nzk4eUZWdz09 \n\n\n\nMeeting ID: 683 5317 5106Passcode: 306128
URL:https://www.scilifelab.se/event/rna-medicine-the-next-frontier-therapeutic-targeting-of-non-coding-rnas/
LOCATION:Gamma 2 Lunchroom\, SciLifeLab\, Tomtebodavägen 23\, Solna\, Sweden
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Event":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211215T130000
DTEND;TZID=Europe/Stockholm:20211215T170000
DTSTAMP:20260403T213310
CREATED:20211019T142541Z
LAST-MODIFIED:20211215T092421Z
UID:10000470-1639573200-1639587600@www.scilifelab.se
SUMMARY:Symposium on the ABC study: Biomarkers of Clinical Relevance – The ABC Risk Scores in Cardiovascular Diseases (CANCELLED)
DESCRIPTION:NOTE! Due to the current situation with the pandemic\, in combination with several of the invited speakers being ill\, this symposia has unfortunately been cancelled. The symposia will take place during the spring of 2022 and more details will come regarding a date and venue \n\n\n\n\n\n\n\nIn the ABC Risk Score project new tools for precision medicine in cardiovascular diseases have been developed. At this half-day symposium achievements obtained within the project will be presented and discussed. The ABC Risk Score project has been financed for 5 years by the Swedish Foundation for Strategic Research. \n\n\n\nThe symposium is free of charge\, including coffee and some light refreshments. For attending the coffee break and evening mingle\, please register by December 8. \n\n\n\nOrganizers\n\n\n\nAgneta Siegbahn: SciLifeLab\, Uppsala University\, department of Medical Sciences and Uppsala Clinical Research Center (UCR)  Lars Lind\, Jonas Oldgren and Lars Wallentin:  Uppsala University\, department of Medical Sciences and Uppsala Clinical Research Center (UCR) \n\n\n\n\n\n\n\n\nREGISTRATION\n\n\n\nPROGRAM
URL:https://www.scilifelab.se/event/symposium-on-the-abc-study-biomarkers-of-clinical-relevance-the-abc-risk-scores-in-cardiovascular-diseases/
LOCATION:Fåhræussalen\, Rudbecklaboratoriet\, Dag Hammarskjölds väg 20\, Uppsala\, -\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20211216T130000
DTEND;TZID=Europe/Stockholm:20211216T140000
DTSTAMP:20260403T213310
CREATED:20210903T123014Z
LAST-MODIFIED:20211202T135817Z
UID:10000437-1639659600-1639663200@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series: Halva Ozlem Altay and Erik Samuelsson
DESCRIPTION:Welcome to join the Campus Solna Seminar Series – an  initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between within Campus Solna. The format consists of two 15 min talks (One speaker from the Alpha-building and one from the Gamma-building respectively)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 13:00-13:50 and following current regulations\, they will be broadcast via zoom. \n\n\n\n \n\n\n\nThis week\n\n\n\nProfound Effects of Combined Metabolic Activators on Metabolic Diseases.Halva Ozlem Altay (Adil Mardinoglu\, alpha 6)  \n\n\n\n \n\n\n\nUsing Spatial Transcriptomics to Profile Tissue Architecture in Glioblastoma and Diffuse Midline GliomaErik Samuelsson (Mats Nilsson\, gamma 4) \n\n\n\nRegistration\n\n\n\nRegister to receive the zoom-link. The same zoom link applies for all Campus Solna Seminar Series\, i.e. only one registration is necessary.
URL:https://www.scilifelab.se/event/campus-solna-seminar-series-halva-ozlem-altay-and-erik-samuelsson/
CATEGORIES:Community
ORGANIZER;CN="SciLifeLab Solna PhD & Postdoc Council":MAILTO:phd-council@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220110T091500
DTEND;TZID=Europe/Stockholm:20220110T120000
DTSTAMP:20260403T213310
CREATED:20220104T120442Z
LAST-MODIFIED:20220104T124039Z
UID:10000503-1641806100-1641816000@www.scilifelab.se
SUMMARY:Data Driven Life Science Seminars at Gothenburg University - Precision medicine and diagnostics
DESCRIPTION:Welcome to attend the first open\, digital seminar as part of the recruitment process given by the top candidates for the two group leader positions in data driven life science (DDLS) at University of Gothenburg. \n\n\n\nThe SciLifeLab and Wallenberg National Program for Data-Driven Life Science (DDLS) is a 12-year initiative funded with a total of 3.1 billion SEK from the KAW.  \n\n\n\n\n\n\n\nRead more about the Seminar
URL:https://www.scilifelab.se/event/data-driven-life-science-seminars-fellows-at-gothenburg-university-precision-medicine-and-diagnostics/
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/01/Bild1-e1641298402677.jpg
ORGANIZER;CN="Data-Driven Life Science @ SciLifeLab":MAILTO:ddls@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220113T100000
DTEND;TZID=Europe/Stockholm:20220113T121500
DTSTAMP:20260403T213310
CREATED:20220104T123540Z
LAST-MODIFIED:20220104T123818Z
UID:10000504-1642068000-1642076100@www.scilifelab.se
SUMMARY:Data Driven Life Science Seminars at Gothenburg University - Epidemiology and infection biology
DESCRIPTION:Welcome to attend the second open\, digital seminar as part of the recruitment process given by the top candidates for the two group leader positions in data-driven life science (DDLS) at University of Gothenburg. \n\n\n\nThe SciLifeLab and Wallenberg National Program for Data-Driven Life Science (DDLS) is a 12-year initiative funded with a total of 3.1 billion SEK from the KAW.  \n\n\n\n\n\n\n\nRead more about the Seminar
URL:https://www.scilifelab.se/event/data-driven-life-science-seminars-at-gothenburg-university-epidemiology-and-infection-biology/
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2022/01/Bild1-e1641298402677.jpg
ORGANIZER;CN="Data-Driven Life Science @ SciLifeLab":MAILTO:ddls@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220117T080000
DTEND;TZID=Europe/Stockholm:20220121T170000
DTSTAMP:20260403T213310
CREATED:20211022T070851Z
LAST-MODIFIED:20211022T071315Z
UID:10000473-1642406400-1642784400@www.scilifelab.se
SUMMARY:NBIS workshop in Neural Nets and Deep Learning
DESCRIPTION:National course open for PhD students\, postdocs\, researchers and other employees in need of Neural networks and Deep Learning skills within all Swedish universities. \n\n\n\nImportant dates\n\n\n\nApplication opens: 2021-11-01 \n\n\n\nApplication closes: 2021-12-05 \n\n\n\nConfirmation to accepted students:  2021-12-19 \n\n\n\nResponsible teachers:  Claudio Mirabello\, Bengt Sennblad \n\n\n\nIf you do not receive information according to the above dates please contact: edu.neural-nets-deep-learning@nbis.se \n\n\n\nCourse fee\n\n\n\nA course fee* of 2200 SEK will be invoiced to accepted participants. This includes lunches\, coffee and snacks. \n\n\n\n*Please note that NBIS cannot invoice individuals \n\n\n\nCourse content\n\n\n\nThis course will give an introduction to the concept of Neural Networks (NN) and Deep Learning. \n\n\n\nTopics covered will include: \n\n\n\nNN building blocks\, including concepts such as neurons\, activation functions\, loss functions\, gradient descent and back-propagationConvolutional Neural NetworksRecursive Neural NetworksAutoencodersBest practices when designing NNs\n\n\n\nLearning Outcomes\n\n\n\nUpon completion of this course\, you will be able to: \n\n\n\nDistinguish the concepts of “Artificial Intelligence”\, “Machine Learning”\, “Neural Networks”\, “Deep Learning”Distinguish between different types of learning (e.g. supervised\, unsupervised\, reinforcement) and recognise which applies to their own problemDistinguish between linear and non-linear approaches and recognise which is best suited for application to their own problemDescribe what a feed-forward neural network (FFNN) is\, along with its components (neurons\, layers\, weights\, bias\, activation functions\, cost functions)Explain how training of a FFNN works from a mathematical point of view (gradient descent\, learning rate\, backpropagation)Execute with pen and paper a few steps of training of a very simple FFNN modelTell the difference between a shallow and a deep networkExplain broadly how different NN architectures are wired and how they workImplement and apply the most appropriate architecture to a given problem/datasetAnalyze training curves and prediction outputs to evaluate if the training has been successfulDebug possible issues with the training and suggest changes to fix themExplain the difference between training\, validation and testingDefine what overfitting is from a mathematical point of view\, and what issues it causesIdentify what constitutes good practices of dataset design and how to avoid introducing information leakage or other biases when building their own datasets\n\n\n\n\n\n\n\n\nCOURSE INFORMATION\n\n\n\nAPPLICATION\n\n\n\n\n\n\n\n\nEntry requirements\n\n\n\nRequired for being able to follow the course and complete the computer exercises: \n\n\n\nFamiliarity with Unix/LinuxAbility to bring your own laptop with Python and Jupyter Notebooks  installed for the practical exercisesProgramming/scripting experience in Python (e.g. having attended the NBIS workshop in basic Python or equivalent)Basic experience of statistics and mathematics (e.g. having attended the NBIS workshop Introduction to Biostatistics and Machine Learning or equivalent)\n\n\n\nDesired \n\n\n\nYou have experience of working with Jupyter NotebooksYou have a necessity  to work with large datasets (e.g. thousands of samples)\n\n\n\nDue to limited space the course can accommodate a maximum of 25 participants. If we receive more applications\, participants will be selected based on several criteria. Selection criteria include correct entry requirements\, motivation to attend the course as well as gender and geographical balance.
URL:https://www.scilifelab.se/event/nbis-workshop-in-neural-nets-and-deep-learning/
LOCATION:Navet\, SciLifeLab Uppsala\, SciLifeLab Uppsala\, BMC C11\, Husargatan 3\, Uppsala\, 75237\, Sweden
CATEGORIES:Course
ORGANIZER;CN="NBIS - National Bioinformatics Infrastructure Sweden":MAILTO:education@nbis.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220118T083000
DTEND;TZID=Europe/Stockholm:20220118T113000
DTSTAMP:20260403T213310
CREATED:20220110T151719Z
LAST-MODIFIED:20220112T123959Z
UID:10000505-1642494600-1642505400@www.scilifelab.se
SUMMARY:DDLS Fellow candidate seminar at Umeå University
DESCRIPTION:Adjacent to the recruitment process for a group leader position in Data-Driven Life Science (DDLS) in precision medicine and diagnostics at Umeå University\, the top candidates will present at a seminar.  \n\n\n\nThe seminar will be held on Zoom\, January 18 2022 08:30 – 11:30. \n\n\n\n \n\n\n\nRead more\n\n\n\n\n\n\n\n \n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nRead more
URL:https://www.scilifelab.se/event/ddls-fellow-candidate-seminar-at-umea-university/
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2021/06/DDLS-landing-page-images.png
ORGANIZER;CN="Data-Driven Life Science @ SciLifeLab":MAILTO:ddls@scilifelab.se
LOCATION:https://www.scilifelab.se/event/ddls-fellow-candidate-seminar-at-umea-university/
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220118T100000
DTEND;TZID=Europe/Stockholm:20220223T160000
DTSTAMP:20260403T213310
CREATED:20211101T090147Z
LAST-MODIFIED:20211101T090730Z
UID:10000477-1642500000-1645632000@www.scilifelab.se
SUMMARY:Digital image analysis for scientific applications – focus MAX IV\, 5-8 ECTS credits
DESCRIPTION:The course aims at giving doctoral students and researchers from different disciplines a sufficient understanding of digital image processing and analysis techniques to solve basic image analysis problems. The content of the course includes methods especially suitable for MAX IV data. The course will also offer an introduction to several freely available software tools (e.g. CellProfiler\, ImageJ\, and ilastik)\, preparing the participants to start using computerized image analysis in their research. By inviting researchers interested in using MAX IV and image analysis\, and allowing them to work on data of similar type but produced elsewhere\, the course has the added value of attracting more researchers to MAX IV and also increasing the awareness of future possibilities giving a head-start in defining and planning MAX IV projects. The basics of image analysis are general\, but by designing examples and hands-on computer exercises based on published data from other world-leading X-ray facilities\, we can prepare participants for the future. After the course\, the participants will not only have a better understanding of the underlying theory and possibilities of image analysis but also be better at designing their experiments in the MAX IV environment. \n\n\n\nCourse Period\n\n\n\nJanuary-February 2022 \n\n\n\nCourse information\n\n\n\nLectures and computer exercises will be given online in English on Tuesdays and Wednesdays\, starting from January 18 to February 23 (weeks 3-8)\, from 10 am to 4 pm.The course will be given remotely via Zoom and Studium \n\n\n\nMore information can be found here \n\n\n\n \n\n\n\nECTS credits\n\n\n\n8 ECTS for the whole course (including a short project)\, 5 ECTS for a shorter version \n\n\n\nApplication\n\n\n\nApplication from course participants should be sent to Damian Matuszewski\, damian.matuszewski@it.uu.se\, not later than 15 December 2021.
URL:https://www.scilifelab.se/event/digital-image-analysis-for-scientific-applications-focus-max-iv-5-8-ects-credits/
LOCATION:Online event via Zoom
CATEGORIES:Course
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220118T110000
DTEND;TZID=Europe/Stockholm:20220118T115000
DTSTAMP:20260403T213310
CREATED:20220114T110350Z
LAST-MODIFIED:20220114T110649Z
UID:10000507-1642503600-1642506600@www.scilifelab.se
SUMMARY:SciLifeLab Uppsala PhD&Postdoc seminar series
DESCRIPTION:Welcome to the SciLifeLab Uppsala PhD&Postdoc seminar series! \n\n\n\n \n\n\n\nFor this occasion the speakers will be: \n\n\n\n1. Inês Neves\, Phd student at the Neuro-Oncology group (Lene Uhrbom’s lab)\, Dept. of Immunology\, Genetics and Pathology \n\n\n\nTitle:Stages and transitions of glioblastoma development from a defined glial cell of origin. \n\n\n\nSummary:Tumor cells displaying OPC identity are common in pediatric brain tumors such as medulloblastoma and malignant glioma. In pediatric malignant glioma it is in fact the most frequent cell state found but the significance of this is not known. We have recently shown that neonatal OPCs can serve as cell of origin for experimental malignant glioma and that these tumors were relevant representatives of pediatric high-grade glioma. The purpose of this project is to investigate the role of OPC identity and how it is connected with OPC origin in pediatric malignant glioma with the goal to understand the processes driving tumor malignancy and uncover tumor cell-specific targetable mechanisms. \n\n\n\n2. Viktor Ek\, PhD student at Mikael Sellin’s group\, Dept. of Medical Biochemistry and Microbiology (IMBIM) \n\n\n\nTitle:Bacterium-bacterium heterogeneity. \n\n\n\nSummary:Bacteria come in all shapes and sizes. Their morphology is no accident\, and often visually similar bacteria have similar lifestyles. Salmonella are gut bacteria that cause severe health problems throughout developing countries. The species Salmonella Typhimurium (S.Tm) are rod-shaped\, single-cell pathogens that swim around using appendages known as flagella. They use this ability to spread out locally and search for fitting sites for infection\, but turn off such virulence machinery to save energy during e.g. replication. In this seminar\, we will discuss our study of a previously overlooked phenotype of S.Tm that we call “doublets”\, a mid-division and simultaneously swimming category. Intriguingly\, this transient phenotype is highly capable of infecting cells. Doublets also swim straighter than the other bacteria\, likely because of their size\, increasing the overall search area for fitting invasion sites for the community. Such divergence contributes to an advantageous diversification of the S.Tm population – and serves as a healthy reminder of individual-to-individual differences in general populations. \n\n\n\nPlease join us using this Zoom link: https://uu-se.zoom.us/j/62510720849
URL:https://www.scilifelab.se/event/scilifelab-uppsala-phdpostdoc-seminar-series/
CATEGORIES:Community
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220119T100000
DTEND;TZID=Europe/Stockholm:20220119T140000
DTSTAMP:20260403T213310
CREATED:20220113T114132Z
LAST-MODIFIED:20220113T120355Z
UID:10000506-1642586400-1642600800@www.scilifelab.se
SUMMARY:DDLS Fellow candidates seminar at the Swedish Museum of Natural History (NRM)
DESCRIPTION:The Swedish Museum of Natural History (NRM) is hiring a tenure-track researcher in Data-Driven Life Science (DDLS)\, within the field of biodiversity and evolution. \n\n\n\nThe research position is funded by the SciLifeLab and Wallenberg National Program for Data-Driven Life Science (DDLS)\, which is a 12-year initiative funded with a total of 3.1 billion SEK from the Knut and Alice Wallenberg Foundation (for more details\, see www.scilifelab.se/data-driven). The DDLS Fellows will be recruited as independent group leaders at the respective host institution\, and will have the opportunity to link up with other local research groups as well as the within the national DDLS programme. \n\n\n\nAs a part of the recruitment process\, the top-ranked candidates for the NRM position will give digital seminars that are open for the general public.  \n\n\n\n \n\n\n\nSchedule of presentations: \n\n\n\n10:00 Nicolas Dussex \n\n\n\n10:30 Michael Westbury \n\n\n\n11:00 Tom van der Valk \n\n\n\n11:30 Break \n\n\n\n13:00 Elin Videvall \n\n\n\n13:30 Benjamin Vernot \n\n\n\n \n\n\n\nOrganizers: NRM DDLS Recruitment Committee
URL:https://www.scilifelab.se/event/ddls-fellow-candidates-seminar-at-the-swedish-museum-of-natural-history-nrm/
LOCATION:Online event via Zoom
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220124T080000
DTEND;TZID=Europe/Stockholm:20220127T170000
DTSTAMP:20260403T213310
CREATED:20211202T114921Z
LAST-MODIFIED:20220330T154213Z
UID:10000496-1643011200-1643302800@www.scilifelab.se
SUMMARY:SciLifeLab Infrastructure outreach week
DESCRIPTION:SciLifeLab is a national infrastructure within life science available for researchers in academia\, healthcare\, and industry. We provide access to a range of nationally unique and internationally competitive technologies in molecular biosciences that can be used to address questions in a broad range of life science disciplines. During four sessions we will highlight our capabilities to provide services within the research areas 1) drug discovery\, 2) precision medicine\, 3) ecosystem surveillance and evolutionary biology and 4) structural biology. We will present relevant technologies available at SciLifeLab and illustrate their utilization by user cases related to the topic of each session.  \n\n\n\n \n\n\n\n  \n\n\n\n\nREGISTER HERE\n\n\n\n\n\n\n\n\nProgram\n\n\n\nJan 24 at 13:00-15:00Is your idea ready for drug discovery?\n\n\n\nNo matter whether your answer is yes or no\, the national infrastructures for target- and drug discovery can help you move your project forward. This session introduces you to the capabilities and technologies spanning the entire range from high-throughput genetic and chemical screening for target identification via drug design using medicinal chemistry and molecular biology to preclinical proof of concept before pre-clinical development. Former and current users will give you a user’s perspective of the infrastructures. \n\n\n\nTarget audience: We welcome all Swedish academic and research groups and industrial users to hear about our platform activities! \n\n\n\nSciLifeLab units presented: Drug Discovery and Development Platform (DDD)\, Chemical Biology Consortium Sweden (CBCS)\, CRISPR Functional Genomics (CFG)\, Chemical Proteomics \n\n\n\n \n\n\n\nJan 25 at 11:00 – 13:00Towards enabling Precision and Translational Medicine\n\n\n\nThis session will cover:– Identification of biomarkers in biofluids and tissues.– Identification of therapeutical targets. Target audience: clinicians and preclinical researchers at Universities and University Hospitals. Startups\, biotech companies\, biotech companies and scientists interested in precision medicine are also welcome.SciLifeLab units presented: Clinical Proteomics and Immunology\, NGI\, CBGE\, Eukaryotic single cell genome\, NBIS\, Spatial and single cell biology\, Clinical Genomics \n\n\n\nJan 26 at 10:00 – 12:00Evolution\, molecular ecology and environment\n\n\n\nThis session will cover: multiple aspects of evolution\, molecular ecology and environment \n\n\n\nTarget audience: Scientists with interest in the fields of evolution\, molecular ecology and environmentSciLifeLab units presented: NGI\, IMT-UmU/Cryo-EM\, Bioinformatics\, Microbial Single Cell Genomics\, Ancient DNA\, and additional units. \n\n\n\nJan 27 at 10:00 – 12:00Visualising life at the molecular level\n\n\n\nThis session will cover:– Protein studies at atomic level– Protein localization in tissue/cells– Protein interactions and dynamics\,Target audience: Structural Biologist (also from industry)\, Preclinical researchers\, and Cell biologists.  SciLifeLab units presented: ISB\, Cellular and Molecular imaging\, NBIS\, Spatial and Single cell biology \n\n\n\n \n\n\n\n\n\nView detailed program
URL:https://www.scilifelab.se/event/scilifelab-infrastructure-outreach-week/
LOCATION:Online event via Zoom
CATEGORIES:Event
ATTACH;FMTTYPE=image/jpeg:https://www.scilifelab.se/wp-content/uploads/2021/12/Artboard-1.jpg
ORGANIZER;CN="SciLifeLab Event":MAILTO:events@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220127T084500
DTEND;TZID=Europe/Stockholm:20220127T170000
DTSTAMP:20260403T213310
CREATED:20211130T143050Z
LAST-MODIFIED:20211130T160953Z
UID:10000492-1643273100-1643302800@www.scilifelab.se
SUMMARY:11th Symposium on Pharmaceutical Profiling in Drug Discovery and Development
DESCRIPTION:Uppsala University’s Department of Pharmacy hosts the 11th Pharmaceutical Profiling meeting on Thursday\, January 27\, 2022\, at The Humanities Theatre\, English Park Campus\, Uppsala. \n\n\n\nJanuary 27\, 2022The Humanities Theatre\, English Park Campus\, UppsalaConfirmed speakers \n\n\n\nKathryn A. Whitehead (Carnegie Mellon University\, US)Ola Engkvist (AstraZeneca\, Sweden)Carolina Wählby (Uppsala University\, Sweden)Samir EL Andaloussi (Karolinska Institutet\, Sweden)Ola Spjuth (Uppsala University\, Sweden)Pär Matsson (University of Gothenburg\, Sweden)Annabelle Biscans (AstraZeneca\, Sweden)\n\n\n\nWe highly encourage all participants to bring a scientific poster.
URL:https://www.scilifelab.se/event/11th-symposium-on-pharmaceutical-profiling-in-drug-discovery-and-development/
LOCATION:Humanities Theater\, Engelska parken\, Uppsala\, 75238\, Sweden
CATEGORIES:Event
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220127T130000
DTEND;TZID=Europe/Stockholm:20220127T140000
DTSTAMP:20260403T213310
CREATED:20220124T151708Z
LAST-MODIFIED:20220124T151804Z
UID:10000516-1643288400-1643292000@www.scilifelab.se
SUMMARY:Campus Solna Seminar Series
DESCRIPTION:Welcome to the Campus Solna Seminar Series – an initiative to promote the fantastic science ongoing at Campus Solna and hopefully forge more internal communication and collaboration between the alpha and gamma buildings. The format will be 2 short 15 min talks (1 speaker from alpha and 1 from gamma)\, with an additional 5 min of questions. Presentation of ongoing (unpublished) projects is strongly encouraged. \n\n\n\nThe seminars are held Thursdays 12:00-12:50 and in Air&Fire\, SciLifeLab Stockholm. \n\n\n\n\n\n\nJoel Hallgren\n\n\n\nKristina Jonas-group\, gamma 5 \n\n\n\nTo stay or to leave? – (p)ppGpp signaling determines bacterial lifestyle decisions during distinct starvation conditions
URL:https://www.scilifelab.se/event/61525/
LOCATION:Online event via Zoom
CATEGORIES:Community
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220128T170000
DTEND;TZID=Europe/Stockholm:20220128T180000
DTSTAMP:20260403T213310
CREATED:20211025T140613Z
LAST-MODIFIED:20220127T120109Z
UID:10000474-1643389200-1643392800@www.scilifelab.se
SUMMARY:FAIRPoints 
DESCRIPTION:Location: Online via Zoom\n\n\n\nSee in your time zone \n\n\n\nFAIRPoints is an event series bringing together people across the research ecosystem to discuss\, highlight\, and share pragmatic solutions to making FAIR a reality.  \n\n\n\nFAIRPoints in collaboration with GoFAIR US\, SDSC\, AGU\, and SciLifeLab Data Centre aims to enhance community building and knowledge sharing across diverse geographic and domain areas in order to cultivate researchers’ engagement in FAIR on a global scale. \n\n\n\n\nOur main aims are to: \n\n\n\nProvide a platform for FAIR conversations featuring the latest developments from the communityHighlight use-cases and how-to-approaches addressing FAIR implementation from researchers and research support staff perspectivesCapture and share the discussion outcomes in pragmatic\, bite-sized lesson material with integrated schemasMake FAIR more accessible to broader audiences Explore FAIR practices from a global perspective\n\n\n\n\n\n\n\n\nThis event series will feature the work done around FAIR implementation across our collaborating organizations\, cultivate engagement and relationships between researchers on all levels\, data service providers\, policy-\, decision makers and organization members in response to rapid scientific progress\, as well as foster the development of impactful and more globally connected FAIR solutions.  \n\n\n\nTo that end\, we would like to welcome all those interested in supporting our activities to join our task force and contribute to our working groups\, including: \n\n\n\nDesigning of machine-actionable training materialCommunity building and outreach Technical support Hosting/Co-hosting virtual events Accessibility and inclusionPartnership and collaboration\n\n\n\nIf you are interested in hearing more and in joining our efforts as we move forward towards launching the event series\, please register for our event to receive the Zoom link! \n\n\n\nTwitter: @FAIR_Points \n\n\n\n\n\n\n\nContact: SciLifeLab Data Centre\, datacentre@scilifelab.se \n\n\n\nRegister here
URL:https://www.scilifelab.se/event/fairpoints/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Data Centre":MAILTO:datacentre@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220202T090000
DTEND;TZID=Europe/Stockholm:20220204T170000
DTSTAMP:20260403T213310
CREATED:20211109T084020Z
LAST-MODIFIED:20211111T104547Z
UID:10000482-1643792400-1643994000@www.scilifelab.se
SUMMARY:Single Cell RNA-seq data analysis
DESCRIPTION:This workshop will introduce the best practice bioinformatics methods for processing and analyses of single cell RNA-seq data via a series of online lectures and computer practicals. The total course duration is 45 hours\, including the online lectures (15 hours) to be watched in advance and practical workshop that will be held on site in Stockholm (30 hours). The practical session is divided into both analysis overview and a Bring-Your-Own-Data (BYOD) day. \n\n\n\nDates \n\n\n\n2022-02-02 to 2022-02-04 on site (9:00 – 17:00) \n\n\n\nVenue \n\n\n\nRooms Air & Fire \n\n\n\nTomtebodavägen 23b\, SciLifeLab Solna\, Stockholm\, Sweden \n\n\n\nImportant dates \n\n\n\nApplication open: 2021-11-05 \n\n\n\nApplication deadline: 2021-12-16 \n\n\n\nCourse Leaders \n\n\n\nPaulo Czarnewski & Åsa Björklund \n\n\n\nContact information for questions regarding the course \n\n\n\nCourse Website\n\n\n\nEmail: edu.sc@nbis.se \n\n\n\nCourse feeThis workshop has a fee of 1700kr and will be invoiced to the selected participants *. Applications without complete invoice information will not be considered. Course fees cover all coffee breaks\, all lunches and 1 course dinner. \n\n\n\n* Please note that NBIS cannot invoice individuals. \n\n\n\nTopics covered will include \n\n\n\nOverview of the current scRNAseq technologiesBasic overview of pipelines for processing raw reads into expression valuesQuality control and normalizationDimensionality reduction techniquesData integration and batch correctionDifferential gene expressionClustering techniquesCelltype predictionTrajectory inference analysisAnalysis of spatial transcriptomics datasetsComparison of different analysis pipelines such as Seurat\, Scran and Scanpy\n\n\n\nWho can apply? \n\n\n\nThis is a national course. The course is open for PhD students\, postdocs\, group leaders and core facility staff within all Swedish universities. We do accept application from other countries\, but give priority to applicants from Swedish universities prior to applicants from industry and academics from other countries. \n\n\n\nPlease note that NBIS training events do not provide any formal university credits. The training content is estimated to correspond to a certain number of credits\, however the estimated credits are just guidelines. If formal credits are crucial\, the student needs to confer with the home department before submitting a course application in order to establish whether the course is valid for formal credits or not. \n\n\n\nPractical exercises will be performed using either R or Python\, so we only accept students that fulfill the entry requirements (see below). NBIS offers \n\n\n\nEntry requirements \n\n\n\nRequired for being able to follow the course and complete the practial exercises: \n\n\n\nYour own laptop with the following specs:\n\nOperating system Win10\, OS X or Linux\nAt least 8 GB of RAM.\nOperating system Win10\, OS X or Linux\nAt least 30 GB of free storage\nHave full access to your computer (admin permissions).\n\nYou are used to scripting in:\n\nUNIX command line (bash)\nEither R and/or Python\n\nYou already understand the basis of NGS technologiesYou are able to analyze bulk RNA-sequencing dataInstructions on installation will be sent by email to accepted participants.\n\n\n\nDue to limited space the course can accommodate maximum of 25 participants. If we receive more applications\, participants will be selected based on several criteria. Selection criteria include correct entry requirements\, motivation to attend the course as well as gender and geographical balance. \n\n\n\nLink to application \n\n\n\nRead more and register
URL:https://www.scilifelab.se/event/single-cell-rna-seq-data-analysis/
LOCATION:Air&Fire\, SciLifeLab Stockholm\, Tomtebodavägen 23A\, Solna\, Sweden
CATEGORIES:Course
ORGANIZER;CN="NBIS - National Bioinformatics Infrastructure Sweden":MAILTO:education@nbis.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20220204T090000
DTEND;TZID=Europe/Stockholm:20220204T093000
DTSTAMP:20260403T213310
CREATED:20220117T164155Z
LAST-MODIFIED:20220117T171054Z
UID:10000508-1643965200-1643967000@www.scilifelab.se
SUMMARY:IMPRESS-Norway and implementing precision cancer medicine in Norway
DESCRIPTION:On February 4\, oncologist\, and Head of Research at Division of Cancer Medicine at Oslo University Hospital Professor Åslaug Helland will give a talk about her mission with the clinical precision medicine study IMPRESS-Norway that she co-founded in 2021. She is also a Professor at the University of Oslo. Åslaug is the PI of the IMPRESS-N study with the goal of “Improving public cancer care by implementing precision medicine in Norway\,” and it is a national clinical study for patients with advanced cancer after standard therapy\, with multiple Norwegian healthcare partners as well as industry collaborators. The effort is preparing Norway towards the many sustainable future benefits precision medicine has to offer for future healthcare solutions (Read more). \n\n\n\nregister to receive zoom link\n\n\n\nBiography \n\n\n\n\n\n\n\nÅslaug Helland\, MD\, PhD\, is a Group leader at the Institute for Cancer Research\, Norwegian Radium Hospital (NRH)\, Oslo\, Norway\, and Senior oncologist\, Dept of Oncology\, Oslo University Hospital\, Radiumhospital. She is also Professor at the University of Oslo Institute of Clinical Medicine. Åslaug obtained her MD degree in 1995\, and later her PhD in Medicine in 2000\, from the University of Oslo. She pursued her postdoctoral studies during 2003/2004 at Stanford University\, and in 2007/2008 as a visiting scientist at the Peter MacCallum Cancer Centre in Melbourne Australia\, adding to her international experience. Åslaugs research group focuses on translational studies on solid tumours\, with a special interest in pancreatic cancers\, lung cancers\, ovary cancers and colorectal cancers. They perform whole genome analyses on patient material\, aiming at identifying predictive and prognostic biomarkers as well as more targeted analyses for the identification of pathways and immune mechanisms of interest. By increasing the understanding of the underlying biology of tumour development\, they aim at improving cancer patient care. She furthermore led several clinical and translational studies in lung cancer. \n\n\n\nÅslaug is the PI of the IMPRESS-Norway study with the goal of “Improving public cancer care by implementing precision medicine in Norway\,” and it is a national clinical study for patients with advanced cancer after standard therapy. During 2019\, Oslo Cancer Cluster hosted a series of workshops with public and private stakeholders in cancer with the goal to accelerate the implementation of cancer precision medicine in Norway. The initial idea for IMPRESS emerged in one of these workshops. A dedicated team at Oslo University Hospital quickly turned it into a national effort together with colleagues at university hospitals across Norway. \n\n\n\nIMPRESS involves the active support of leading global pharmaceutical companies that will provide the study drugs and contribute with per patient fees. Public funding will help to ensure this innovative study paves the way for more cancer clinical trials in Norway. National infrastructure for precision diagnostics is needed and is currently being set up at all Norwegian cancer hospitals. Cancer patients who are eligible for clinical trials can soon be tested and selected based on their specific genetic profile. \n\n\n\n\n\n\n\n\n“Clinical Talks” has been renewed for yet another exciting\, innovative\, and enlightening season. This season will focus on sustainable innovations within Life Sciences\, that have the potential to contribute to a better climate friendly future for our future generations. Also new this year is that the seminar is co-organized in a collaboration between SciLifeLab and KI Innovations . \n\n\n\nSeason 5\, will be held September 2021 until March 2022 with scheduled Talks\, during Friday mornings 09-09:30 am via ZOOM (with some time-zone friendly adjustments for our international speakers). Each session consists of a talk given by our invited speaker followed by Q&A. The seminar is an open educational seminar series for our ever-expanding Life Science community.
URL:https://www.scilifelab.se/event/impress-norway-and-implementing-precision-cancer-medicine-in-norway/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="Clinical Talks":MAILTO:precisionmedicine@scilifelab.se
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END:VCALENDAR