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X-WR-CALDESC:Events for SciLifeLab
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DTSTART;TZID=Europe/Stockholm:20241105T103000
DTEND;TZID=Europe/Stockholm:20241105T170000
DTSTAMP:20260501T144206
CREATED:20240426T130948Z
LAST-MODIFIED:20241024T073225Z
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SUMMARY:Postponed! New hybrid approaches to Precision Medicine: machine learning\, generative AI\, and digital twins
DESCRIPTION:Workshop postponed to the spring – date to be decided!\n\n\n\n \n\n\n\nIf you have questions or suggestions regarding symposia program\, please feel free to contact the chair of the program committee at gunnar.cedersund@liu.se. \n\n\n\nWe look forward to welcoming you to Linköping in the spring 2025! \n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nMembers of The Data-driven Precision Medicine & Diagnostics expert group:Gunnar Cedersund\, Linköping UniversitySven Nelander\, Uppsala UniversityLars Klareskog\, Karolinska InstitutetJohan Trygg\, Umeå UniversityPatrik Georgii-Hemming\, Karolinska InstitutetPäivi Östling\, KI (adj. SciLifeLab Precision Medicine Capability lead)Francis Lee (adj. WASP-HS representative in DDLS)David Gisselsson Nord (adjunct as GMS representant)Janne Lehtiö\, chair (DDLS SG member)
URL:https://www.scilifelab.se/event/new-hybrid-approaches-to-precision-medicine-machine-learning-generative-ai-and-digital-twins/
CATEGORIES:Event
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DTSTART;TZID=Europe/Stockholm:20241108T140000
DTEND;TZID=Europe/Stockholm:20241108T150000
DTSTAMP:20260501T144206
CREATED:20241028T075658Z
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SUMMARY:Swedish Reference Genome Portal Launch
DESCRIPTION:Join us for the official launch of the Swedish Reference Genome Portal. This free service is developed and maintained by the DDLS Data Science Node in Evolution and Biodiversity (DSN-EB) team as part of the SciLifeLab Data Platform\, operated by the SciLifeLab Data Centre. At this event\, we will demonstrate how the Genome Portal reduces barriers to the visualisation and interpretation of genome data studied in Sweden\, while facilitating collaboration\, showcasing researchers’ work\, and promoting Open Science and FAIR data sharing. \n\n\n\nThe Swedish Reference Genome Portal is a web platform for showcasing\, aggregating\, and visualising non-human eukaryotic genome assemblies and genome annotations (co-)produced by researchers affiliated with Swedish institutions. The Genome Portal aims to: \n\n\n\n\nHighlight and showcase genome research conducted in Sweden.\n\n\n\nLower barriers to accessing\, visualising\, and interpreting genome data.\n\n\n\nPromote the publication of genomic annotations\, which are rarely shared.\n\n\n\nEnsure all data displayed on the Genome Portal aligns with FAIR principles and is available in public repositories.\n\n\n\n\nThe DSN-EB team comprises system developers\, data stewards\, and bioinformaticians affiliated with SciLifeLab Data Centre and the National Bioinformatics Infrastructure Sweden (NBIS)\, based at Uppsala University and the Swedish Museum of Natural History. \n\n\n\nThis service is supported by SciLifeLab and the Knut and Alice Wallenberg Foundation through the Data-Driven Life Science (DDLS) program\, as well as by the Swedish Foundation for Strategic Research (SSF). \n\n\n\nRegistration\n\n\n\n \n\n\n\nAgenda\n\n\n\n2:00-2:10 pmWelcome and introduction\, Henrik Lantz\, NBIS2:10-2:45 pmOverview of the Swedish Reference Genome Portal Introduction and live demo\, Daniel Brink\, SciLifeLab Data CentreTechnical implementation\, Rory Crean\, SciLifeLab Data CentreFeatures that boost and facilitate researchers’ work\, Angela P. Fuentes-Pardo\, SciLifeLab Data Centre2:45-3:00 pmQ&A\n\n\n\nRegistration will be open until the day of the event (November 8th\, 2024) at 12:00 CEST. \n\n\n\nThis event will be recorded and made available on the SciLifeLab Youtube channel. \n\n\n\nFor more information\, please contact dsn-eb@scilifelab.se.
URL:https://www.scilifelab.se/event/swedish-reference-genome-portal-launch/
LOCATION:Online event via Zoom
CATEGORIES:Event
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DTSTART;TZID=Europe/Stockholm:20241114T133000
DTEND;TZID=Europe/Stockholm:20241114T153000
DTSTAMP:20260501T144206
CREATED:20240904T150417Z
LAST-MODIFIED:20241014T130734Z
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SUMMARY:DDLS Annual Conference 2024 workshops
DESCRIPTION:During the second day of the DDLS Annual conference 2024 participants will have an opportunity to attend one of the workshops. The workshops are directed at researchers in data-driven life science in all career stages. \n\n\n\nEach workshop has a limited number of seats\, on the first come first served basis. Those registered after the limit is reached will be placed on the waiting list. \n\n\n\nThe workshops will take place in various rooms of the main venue of the conference – Hilton Slussen. All workshops start at 13:30 but end at various times. Coffee/tea and fika will be served during the workshops.  \n\n\n\nFeel free to email datacentre@scilifelab.se with any questions. \n\n\n\nWorkshops\n\n\n\nHands-on with Large Language Models\n\n\n\nHeld by: Ola Spjuth (UU\, SciLifeLab) and AI data engineers at SciLifeLab Data Centre \n\n\n\nWhere and when: November 14\, 2024 at 13:30-15:00\, room Sofokles \n\n\n\nDescription: Tools based on Large Language Models (LLMs) such as ChatGPT\, Microsoft Copilot\, Perplexity\, etc. are now widely used in various tasks such as drafting and editing texts\, analyzing data\, writing and troubleshooting code\, creating images\, etc. This workshop is aimed at researchers who never used or only recently started using LLM-based tools and would like to learn more. We will start with a theoretical introduction of how LLMs work and in which tasks they can be especially useful. Workshop participants can then choose from a number of hands-on exercises that they can complete on their own laptops. We will be available to help and answer questions. \n\n\n\n\n\n\n\nPackaging and sharing data science applications as Docker container images\n\n\n\nHeld by: Data Engineers at the SciLifeLab Data Centre. \n\n\n\nWhere and when: November 14\, 2024 at 13:30-15:30\, room Platon \n\n\n\nDescription: This workshop is aimed at life science researchers who want to share data science applications such as apps built with R Shiny\, Plotly Dash\, Gradio\, Streamlit etc. publicly or with colleagues. Docker container images are a powerful tool for packaging and sharing applications and analyses widely used in both industry and academia. During the workshop we will first present the basics of Docker and how to build Docker container images. Building on this knowledge participants will then carry out hands-on exercises on their own laptops while we will be available to help. Finally\, we will also demonstrate how to publish applications packaged as Docker images on SciLifeLab Serve (https://serve.scilifelab.se) and make them available on the web with a URL (for example\, to be used in research papers or other output). SciLifeLab Serve is a service available free of charge to all life science researchers in Sweden. The participants are welcome to bring their own data science applications\, and we can help packaging them on the spot. \n\n\n\n\n\n\n\nHow to boost your career using Open Science\n\n\n\nHeld by: Joanna Sendecka\, Suné Joubert\, & Parul Tewatia\, SciLifeLab Data Center; Ineke Luijten\, SciLifeLab Training Hub \n\n\n\nWhere and when: November 14\, 2024 at 13:30-15:30\, room Eros \n\n\n\nDescription: Over the past years\, the evaluation of researchers by institutions\, journals\, and funders has been expanded to encompass more than just publication metrics. This workshop is aimed at researchers that want to learn how to use new researcher evaluation criteria to boost their careers by increasing visibility of and gaining credit for all of their research outputs. In this workshop\, we will discuss past\, current\, and future evaluation criteria\, and will then provide hands-on exercises to demonstrate how researchers can get and give credit for a range of research outputs\, including datasets\, software\, code\, public engagement\, and training. We will do this in adherence with DORA and CoARA principles\, and the use of a variety of tools\, such as CRediT taxonomy and ORCID. \n\n\n\n\n\n\n\nRegistration\n\n\n\nSince there is a limited number of seats in each workshop please sign up only if you intend to attend. \n\n\n\nRegister to join workshops
URL:https://www.scilifelab.se/event/ddls-annual-conference-2024-workshops/
LOCATION:Hilton Slussen\, Guldgränd 8\, 104 65\, Stockholm
CATEGORIES:Event
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