SciLifeLab Workshop on Cell Profile
Workshop on Quantitative Automated Analysis of Phenotypes from Microscopic Images using Cell Profiler
June 14, 2012 Rudbeck Lab Room: Jan Waldenström
Free, open-source software , user friendly, tailored for biologists . Available for download from www.cellprofiler.org. Also installed on the UPPMAX computing cluster for large scale experiments.
9.00-12.00 Applied lectures
Get started with Cell Profiler
Identify relevant objects (e.g. cells)
Use machine learning to classify cells based on the measured features
13.00-16.00 Personalized assistance with your own data
Bring your computer with CellProfiler and CellProfiler Analyst installed to actively participate to the workshop.
Carolina Wählby, Alexandra Pacureanu, Martin Simonsson
Registration & questions
www.cellprofiler.org (win, mac & linux)