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DTSTART;TZID=Europe/Stockholm:20251015T110000
DTEND;TZID=Europe/Stockholm:20251015T120000
DTSTAMP:20260417T124729
CREATED:20250915T125335Z
LAST-MODIFIED:20251125T145149Z
UID:10001614-1760526000-1760529600@www.scilifelab.se
SUMMARY:Onto-what? Everything you (n)ever wanted to know about ontologies or were too embarrassed to ask
DESCRIPTION:The use of ontologies is a cornerstone of data interoperability and reusability\, representing an essential precursor to cross-domain data integration\, modelling\, knowledge discovery and even the exploitation of new AI-related technologies. Despite all this\, ontologies are still sadly underused in existing data management practices for several reasons\, including their perceived complexity\, insufficient knowledge of available tooling solutions and lack of easily accessible best practice guidance. In this session\, we will demystify the world of ontologies by clearing up some common misconceptions and provide you with an overview of existing tools and resources for using ontologies more effectively in your work. \n\n\n\nPresenter: Danielle Welter – Principal Data Scientist\, Luxembourg National Data Service (LNDS) – ELIXIR Luxembourg \n\n\n\nMore information\n\nThis event is part of the SciLifeLab Data Management seminar series\, an event series by the SciLifeLab Data Centre and NBIS joint Data Management team.The goal of the events in this seminar series is to provide interesting interactive seminars around topics related to Research Data Management and Open Science in general\, and to foster discussions around best practices. \n\n\nResearch Data Management (RDM) concerns the organization\, storage\, preservation\, and sharing of data that is collected and analyzed during a research project. Proper planning and management of research data will make project management easier and more efficient while projects are being performed. It also facilitates sharing and allows others to validate as well as reuse the data.Open Science is a set of principles and practices that aim to make scientific research from all fields accessible to everyone for the benefits of scientists and society as a whole. Open science is about making sure not only that scientific knowledge is accessible but also that the production of that knowledge itself is inclusive\, equitable and sustainable. \n\n\nThe events are open to everyone working at or affiliated with a Swedish research institute or university. We welcome all researchers\, educational professionals\, staff\, RDM professionals\, and others with an interest in life sciences\, from all university levels. The events are informal and inclusive\, so feel welcome to join and participate in our interesting discussions! \n\n\nThe events will be recorded and published openly after the seminars on the SciLifeLab YouTube channel. The slides will be made available at our SciLifeLab Data Repository. More information about SciLifeLab Data Centre and NBIS joint Data Management seminar series: https://www.scilifelab.se/data/scilifelab-data-management-seminar-series/ \n\n\nIf you have suggestions for topics or presentations\, please contact us at data-management@scilifelab.seFor more information or inquiries\, please contact us at  data-management@scilifelab.se
URL:https://www.scilifelab.se/event/datamanagement-ontologies/
LOCATION:virtual event
CATEGORIES:Event
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ORGANIZER;CN="Open Science Seminar Series":MAILTO:data-management@scilifelab.se
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DTSTART;TZID=Europe/Stockholm:20251021T120000
DTEND;TZID=Europe/Stockholm:20251022T153000
DTSTAMP:20260417T124729
CREATED:20250319T084058Z
LAST-MODIFIED:20251020T092843Z
UID:10001506-1761048000-1761147000@www.scilifelab.se
SUMMARY:Workshop on Enhancing Cross-Platform Collaboration in Integrative Structural Biology
DESCRIPTION:Integrative Structural Biology (ISB) is a rapidly advancing field that relies on the integration of diverse datasets\, such as those from Cryo-electron microscopy\, X-ray crystallography\, NMR\, Mass spectrometry and Modeling. By integrating different structural techniques we can solve the structure of challenging biological systems\, which wouldn’t be possible using a single type of data. However\, the current landscape is fragmented\, with significant challenges in data interoperability\, tool integration\, and cross-disciplinary collaboration. The primary objective of this workshop is to foster cross-platform collaboration by bringing together key stakeholders from experimental and computational platforms. \n\n\n\nThe workshop aims: To facilitate the exchange of ideas and experiences\, define the technical and scientific requirements for an Integrative Structural Biology Portal and engage with experts in multimodal data analysis.  \n\n\n\nThis event is organized by SciLifeLab Lund and the Integrated Structural Biology Platform. \n\n\n\nRegister HERE\n\n\n\nScientific Committee:Cecilia Persson\, University of GothenburgEsko Oksanen\, Lund University/ESSNicholas Pearce\, Linköping UniversityWolfgang Knecht\, Lund UniversityWojtek Potrzebowski\, SciLifeLab Lund \n\n\n\nLocal Organizing Committee:Wojtek Potrzebowski\, SciLifeLab LundAnabella Aguilera\, SciLifeLab LundSophie Hellstrand\, SciLifeLab Lund \n\n\n\nSchedule \n\n\n\nDay 1  \n\n\n\n\n12:00 – 13:00 Registration & Lunch  \n\n\n\n\n\n13:00 – 13:10 Welcome\n\n\n\n\n\n13:10 – 13:55 Keynote Harald Schwalbe\, Johann Wolfgang Goethe-University\, Frankfurt\, “The future of integrated structural biology – selected examples from the European Integrated Infrastructure: Instruct-ERIC”\n\n\n\n\n\n13:55 – 14:15 Giulio Tesei\, Malmö University\, “Data-driven modeling of intrinsically disordered and multi-domain proteins”  \n\n\n\n\n\n14:15 – 14:30 Nabanita Mandal\, Lund University\, “Unraveling the Conformational Landscape of Amyloid Precursor Protein Intracellular Domain” \n\n\n\n\n\n14:30 – 15:00 Coffee Break\n\n\n\n\n\n15:00 – 15:45 Keynote: Max Bonomi\, Institut Pasteur\, France\, “Probabilistic approaches for integrative structural biology”\n\n\n\n\n\n15:45 – 16:15 Ingemar André\, Lund University\, “How to optimally combine experimental data with molecular modeling to describe the structure of complex protein mixtures in solution”\n\n\n\n\n\n16:15 – 16:30 Malin Bäckström\, University of Gothenburg\, “Protein Production Sweden – a national research infrastructure for protein production”\n\n\n\n\n\n16:30 – 17:15 Bridging the Gaps: Tackling Real-World Challenges in Integrative Structural Biology. (A panel discussion on supporting users in navigating experimental design\, data integration\, and reproducibility in integrative structural biology)\n\n\n\n\n\n17:15 – 17:30 Javier Fernandez Collado\, ThermoFisher Scientific\, “High throughput\, high resolution: Pushing the limits of structure determination with Cryo-TEMs and SmartEPU” \n\n\n\n\n\n17:30 – 19:30 Workshop Mingle\n\n\n\n\nDay 2  \n\n\n\n\n08:45 – 09:00 Coffee\n\n\n\n\n\n09:00 – 09:40 Björn Forsberg\,  Linköping University\, “Tools and perspectives for cryo-EM processing to answer biological questions”\n\n\n\n\n\n09:40 – 10:10 Mikael Akke\, Lund University\, “Resolving Protein–Ligand Binding Pathways by NMR Relaxation”\n\n\n\n\n\n10:10 – 10:30 Coffee Break\n\n\n\n\n\n10:30 – 11:15 Keynote: Karin Lindkvist\, Lund University\, “Aquaporins in health and disease“\n\n\n\n\n\n11:15 – 11:35 Nandan Haloi\, KTH\, “Protein dynamics in the data-driven era”\n\n\n\n\n\n11:35 – 11:50 Carl G. Henning Hansen\, University of Copenhagen\, “A Bayesian approach to interpret time-resolved experiments using molecular simulations”  \n\n\n\n\n\n11:50 – 12:20 Pablo Villanueva-Perez\, Lund University\, “AI for 3D and 4D (3D+time) inverse problems” \n\n\n\n\n\n12:20 – 13:15 Lunch\n\n\n\n\n\n13:15 – 13:45 Claudio Mirabello\, Linköping University\, “Integration of experimental restraints in protein structure predictions with AlphaFold” \n\n\n\n\n\n13:45 – 14:30 Panel Discussion: Multi-Modal AI: The Next Frontier in Structural Biology?\n\n\n\n\n\n14:30 – 15:00 Final Plenary: Strategic Roadmap for Future Collaboration 
URL:https://www.scilifelab.se/event/workshop-on-enhancing-cross-platform-collaboration-in-integrative-structural-biology/
LOCATION:The Loop\, Rydbergs torg 4\, Lund\, Sweden
CATEGORIES:Event
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