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DTSTART;TZID=Europe/Stockholm:20260602T100000
DTEND;TZID=Europe/Stockholm:20260602T110000
DTSTAMP:20260706T232614
CREATED:20260429T100852Z
LAST-MODIFIED:20260430T075757Z
UID:10001810-1780394400-1780398000@www.scilifelab.se
SUMMARY:Webinar: Interactive multi-dataset dashboards with Depictio: from creation to sharing through a public URL
DESCRIPTION:Welcome to join us for the Tools for AI/ML research in life sciences event series for our next webinar. We welcome Thomas Weber\, ARISE fellow at EMBL to present “Interactive multi-dataset dashboards with Depictio: from creation to sharing through a public URL”.  \n\n\n\nDate and time: June 2 at 10:00-11:00 Stockholm time (CEST)Speaker: Thomas Weber\, ARISE fellow at EMBL \n\n\n\nRegistration: Please register before June 2\, at 9.00 CEST. \n\n\n\n\nRegister\n\n\n\n\nAbstract \n\n\n\nAs expectations around open data sharing and interactive access to research outputs continue to grow\, researchers increasingly need ways to present their data as explorable dashboards rather than static figures. Depictio is an open-source platform that enables researchers to build multi-datasets dashboards through an intuitive graphical interface. Depictio can be downloaded and used locally on your computer or life science researchers at Swedish universities can create an instance online for free through SciLifeLab Serve. \n\n\n\nIn this webinar\, we will walk through the following steps: creating a project\, uploading multiple datasets\, such as tabular results and MultiQC reports\, and\, finally\, building a multi-tab dashboard that combines data from different sources into unified\, interactive visualizations. We will show how to create and layout Plotly-based components such as figures\, metrics cards\, tables and interactive components. Furthermore\, we will demonstrate Depictio’s private-to-public migration: develop your dashboard in a private instance\, then export and import it to a public instance on SciLifeLab Serve for public sharing. This webinar is aimed at life science researchers who produce data they want to visualize and share interactively\, whether from bioinformatics pipelines\, experimental workflows\, or other research outputs\, without building a full web application from scratch. \n\n\n\n\n\n\n\nTools for AI/ML research in life sciences is an event series by the SciLifeLab Data Centre aimed at life science researchers who use data science and machine learning methods in their work. The goal of the events in this seminar series is to provide introductions to different tools for ML research but also to foster discussions around our practices and how they can be improved. We organise in-person workshops and webinars as part of the event series. The events are open to all researchers in Sweden and beyond\, regardless of SciLifeLab affiliation. \n\n\n\nContact: SciLifeLab Data Centre  serve@scilifelab.se
URL:https://www.scilifelab.se/event/depictio_dashboards/
LOCATION:Online event via Zoom
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Data Centre":MAILTO:datacentre@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20260609T100000
DTEND;TZID=Europe/Stockholm:20260609T153000
DTSTAMP:20260706T232614
CREATED:20260507T072252Z
LAST-MODIFIED:20260508T052101Z
UID:10001815-1780999200-1781019000@www.scilifelab.se
SUMMARY:Hands-on Workshop: Developing AI Agents in Life Sciences (Gothenburg)
DESCRIPTION:We are delighted to invite you to join our upcoming workshop on “Developing AI Agents in Life Sciences”\, organized by SciLifeLab Data Centre. AI agents are emerging as autonomous systems that orchestrate scientific workflows by interacting with digital tools and data sources. These have various implications for life science research. They can\, for example\, simplify complex analyses by automating data integration\, run computational models\, and coordinate experimental steps\, making research pipelines more efficient and reproducible. In this on-site hands-on workshop held at Korallrevet\, Natrium building (Medicinaregatan 7B) in Gothenburg\, we will introduce and discuss AI Agents in life science\, and engage in collaborative practical sessions. Welcome! \n\n\n\nDate: 2026-06-09Time: 10.00-15.30 (coffee will be served from 9.30). Fika and lunch provided free of charge. Location: room Korallrevet\, Natrium\, Medicinaregatan 7B\, Gothenburg. No remote participation.  \n\n\n\nTarget audience: Researchers\, PhD students\, research infrastructure interested in learning more about and trying hands-on exercises with AI Agents. Participants with any university affiliation and industry researchers are welcome. Basic Python programming skills are required; previous experience working with Jupyter notebooks would be helpful. Participants must bring their own laptop. \n\n\n\nRegistration: We expect many to be interested in attending this event. After we reach max capacity\, we will open a waitlist. If you cannot join\, please cancel your registration as soon as possible to make your spot available for someone else. Please add dietary restrictions to your registration. Please register by June 5th at 24.00. \n\n\n\n\nRegister for the workshop\n\n\n\n\nSpeakers and Facilitators:  Chris Long Huynh (PhD candidate\, Uppsala University)\, and Mahbub Ul Alam and Johan Alfredéen (Data Engineers (AI) at SciLifeLab Data Centre). \n\n\n\nThe workshop will feature a series of engaging presentations\, interactive discussions\, and collaborative sessions focusing on: \n\n\n\n\nIntroduction to AI agent technologies\n\n\n\nApplications\, opportunities and challenges of AI Agents in life science\n\n\n\nHands-on tutorials with reasoning models\, LangChain and MCP servers\n\n\n\nDiscussions on the role of AI agents in shaping the future of life science\n\n\n\n\nAgenda \n\n\n\n09:30-10:00 Light breakfast and networking \n\n\n\n10.00-10.15 Presentation session 1: Introduction: Exploring how AI agents can transform life sciences. Speaker: Johan Alfredéen. \n\n\n\n10.15-10.30 Demonstration Session: AI agents in action. Facilitators: Mahbub Ul Alam. \n\n\n\n10:30-12:00 Hands-on Session 1: Developing AI agents with LangChain & ReAct. Session Facilitators: Dinh Long Huynh\, Mahbub Ul Alam.  \n\n\n\n12:00-13:00 Lunch and networking \n\n\n\n13:00-13:30 Continuation of Hands-on Session 1: Developing AI agents with LangChain & ReAct. \n\n\n\n13:30-15:00 Hands-on Session 2: AI agent collaboration with the Model Context Protocol (MCP). Session Facilitators: Mahbub Ul Alam\, Johan Alfredéen\, Dinh Long Huynh. \n\n\n\n15:00-15:15 Presentation Session 2: Deploying AI Agents: Legal\, Technical\, and Practical Considerations. Speaker: Johan Alfredéen. \n\n\n\n15:15-15:30 Concluding Session: Open Q&A  \n\n\n\n15:30 Fika and networking \n\n\n\nRegistration: Please add dietary restrictions to your registration. If you cannot join\, please cancel your registration. \n\n\n\nThis event is a organised by SciLifeLab Data Centre. For questions please contact  serve@scilifelab.se .
URL:https://www.scilifelab.se/event/ai-agents-in-life-science-gothenburg/
LOCATION:Korallrevet\, Natrium\, Medicinaregatan 7B\, Gothenburg\, 413 90\, Sweden
CATEGORIES:Event
ORGANIZER;CN="SciLifeLab Data Centre":MAILTO:datacentre@scilifelab.se
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Stockholm:20260615T110000
DTEND;TZID=Europe/Stockholm:20260615T120000
DTSTAMP:20260706T232614
CREATED:20260512T081848Z
LAST-MODIFIED:20260615T124007Z
UID:10001816-1781521200-1781524800@www.scilifelab.se
SUMMARY:Striving for Open Science Compliance in Sweden: Achieved Goals and Remaining Challenges
DESCRIPTION:DescriptionOpen Science is high on the Swedish research agenda\, but are we actually delivering increased openness? Join this seminar to find out what the latest data reveals about where progress is being made\, where it is stalling\, and what the findings mean for your own work with open access\, open data\, and research visibility. \n\n\n\nOpen Science has become increasingly embedded in Swedish research policy. Despite ambitious national targets\, Sweden did not achieve full open access to academic publications by 2021\, and open research data is unlikely to reach full implementation by 2026\, highlighting a persistent gap between policy ambitions and institutional practice. This presentation examines the implementation of Open Science in Swedish higher education institutions using longitudinal data from the SUHF Roadmap for Open Science surveys (2023–2025\, as published in https://doi.org/10.7557/11.8391)\, including newly available 2026 results. It highlights areas where implementation has progressed most strongly\, identifies areas where development remains weak\, and discusses the structural changes needed for Open Science to become fully embedded across Swedish academia. \n\n\n\nPresenter: Ineke Luijten\, (PhD)\, Scientific Training Officer at SciLifeLab & Analyst of the annual SUHF OS implementation survey \n\n\n\nRecording: https://www.youtube.com/watch?v=7BDKxUjJ524  \n\n\n\nMore information\nThis event is part of the SciLifeLab Open Science seminar series\, an event series by the SciLifeLab Data Centre and NBIS joint Data Management team.The goal of the events in this seminar series is to provide interesting interactive seminars around topics related to Research Data Management and Open Science in general\, and to foster discussions around best practices. \n\n\n\nResearch Data Management (RDM) concerns the organization\, storage\, preservation\, and sharing of data that is collected and analyzed during a research project. Proper planning and management of research data will make project management easier and more efficient while projects are being performed. It also facilitates sharing and allows others to validate as well as reuse the data.Open Science is a set of principles and practices that aim to make scientific research from all fields accessible to everyone for the benefits of scientists and society as a whole. Open science is about making sure not only that scientific knowledge is accessible but also that the production of that knowledge itself is inclusive\, equitable and sustainable. \n\n\n\nThe events are open to everyone working at or affiliated with a Swedish research institute or university. We welcome all researchers\, educational professionals\, staff\, RDM professionals\, and others with an interest in life sciences\, from all university levels. The events are informal and inclusive\, so feel welcome to join and participate in our interesting discussions! \n\n\n\nThe events will be recorded and published openly after the seminars on the SciLifeLab YouTube channel. The slides will be made available at our SciLifeLab Data Repository.More information about SciLifeLab Data Centre and NBIS joint Open Science seminar series: https://www.scilifelab.se/data/scilifelab-data-management-seminar-series/ \n\n\n\nIf you have suggestions for topics or presentations\, please contact us at data-management@scilifelab.seFor more information or inquiries\, please contact us at  data-management@scilifelab.se
URL:https://www.scilifelab.se/event/openscience-compliance/
CATEGORIES:Event
ATTACH;FMTTYPE=image/png:https://www.scilifelab.se/wp-content/uploads/2024/02/DC_seminar-series_background1-1.png
LOCATION:https://uu-se.zoom.us/j/65432842101?from=addon
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