Bengt Sennblad

Head of Unit: Support, Infrastructure and Training, Uppsala University

Key publications

Publications from NBIS Health and Clinical Support team

De Laere, B., … Mayrhofer, M., et al., 2024.
Androgen receptor pathway inhibitors and taxanes in metastatic prostate cancer: an outcome-adaptive randomized platform trial.
Nat Med 30, 3291–3302. https://doi.org/10.1038/s41591-024-03204-2

Hafstað V., … Larsson M., et al. 2023.
Improved detection of clinically relevant fusion transcripts in cancer by machine learning classification.
BMC Genomics 24, 783. doi: 10.1186/s12864-023-09889-y. PMID: 38110872; PMCID: PMC10726539.

Nazziwa, J., Freyhult, E., Hong, MG. et al. 2024.
Dynamics of the blood plasma proteome during hyperacute HIV-1 infection.
Nat Commun 15, 10593. https://doi.org/10.1038/s41467-024-54848-0

De Marchi, T., Pyl, P.T., … DiLorenzo, S. et al.
Proteogenomics decodes the evolution of human ipsilateral breast cancer.
Commun Biol 6, 139 (2023). https://doi.org/10.1038/s42003-023-04526-6

Ekman, D., Sennblad, B., …et al.,
Stratified genetic analysis reveals sex differences in MPO-ANCA-associated vasculitis
Rheumatology, Volume 62, Issue 9, September 2023, Pages 3213–3218, https://doi.org/10.1093/rheumatology/kead152

Bengt Sennblad

Bengt works as a manager of the NBIS Health and Clinical Support team, which is part of the Support, Infrastructure and Training unit of the SciLifeLab Bioinformatics platform (NBIS). The team provides advanced bioinformatics support and training to Swedish life science, focusing on studies with medical and health-related questions.

We mainly work with human data, including genomics, transcriptomics, proteomics, metabolomics and phenotypic/clinical information. Our work includes consultation and hands-on support in study design, data processing, genetic associations, biomarker identification, cancer genomics, multi-omics integration and machine learning. We are engaged in the SciLifeLab & Wallenberg National Program for Data-Driven Life Science (DDLS), by providing bioinformatics support within the DDLS Precision Medicine research area.

For further information about NBIS services and activities, please see https://nbis.se.

Team managers:

Pär Engström
Bengt Sennblad

Previous research experience:

Bengt has a PhD in Biology and an Associate professorship in Computer Science. His previous research span molecular evolution of plants, probabilistic models and algorithms for studying gene family evolution in a multispecies context, analyses and development of new methods in genome-wide association analysis, particularly in relation to cardiovascular disease.

Group Members:

Prasoon Agarwal, LU
Olga Dethlefsen, SU
Sebastian DiLorenzo, UU
Diana Ekman, SU
Payam Emami, SU
Eva Freyhult, UU
Mun-Gwan Hong, SU
Marcin Kierczak, UU
Malin Larsson, LiU
Yuan Li, LU
Julie Lorent, SU
Markus Mayrhofer, UU
Paul Pyl, LU
Ann-Sofi Sandberg, KI
Louella Vasquez, LU

Last updated: 2025-01-17

Content Responsible: victor kuismin(victor.kuismin@scilifelab.uu.se)