Fredrik Swartling


Fredrik Swartling
Uppsala University

Research Interests

 

The aim of our research is to improve survival of medulloblastoma, the most common pediatric brain tumor. Medulloblastomas have recently been classified into four distinct molecular subgroups and subgroup-specific driver genes have been suggested by us and others. We have shown how MYCN, a transcription factor important for normal brain development, can drive medulloblastoma when its half-life is increased by aberrant stabilization in cells. In fact, MYC proteins, like MYC and MYCN, are mis-regulated in more than half of all types of human cancer including medulloblastoma. About 3 out of 4 children survive from medulloblastoma but survivors often experience long term side effects from current aggressive treatment. Medulloblastoma cases with elevated MYC/MYCN levels strongly correlate with poor prognosis.

We want to understand in detail what drives childhood brain tumor development and tumor recurrence, by using and developing experimental models in where we overexpress MYC proteins. We culture cells from patient samples in stem cell-like conditions and use advanced bioinformatics to study genetic differences and tumor sub-group specificities. We use normal human cerebellar stem cells as starting material to model medulloblastoma development. In these cells we overexpress oncogenes, or silence suppressor genes, that are defined clinically relevant medulloblastoma drivers. Recently, we showed that the stem cell factor SOX9 is promoting migration and metastasis of medulloblastoma cells and we are currently studying how rare SOX9-positive cells could give rise to brain tumor relapse. Together with researchers at the Uppsala genome center/SciLifeLab we have developed a forward genetics screen to identify novel drivers and specifiers of the different subtypes of medulloblastoma as well as glioma, another brain tumor that affects both children and adults.

Finally, we have identified two new drugs that targets MYCN. The first drug targets MYCN production by epigenetic regulation and the other drug is a tumor cell cycle specific CDK2 inhibitor that can decrease MYCN protein stabilization and tumor progression. Interestingly, if we combine these drugs we can effectively inhibit MYCN-driven brain cancer. It is our sincere hope that this drug combination could be used in future therapies for medulloblastoma patients.

Group members

Holger Weishaupt, Researcher
Sonja Hutter, Postdoc
Sara Bolin, Postdoc
Geraldine Giraud, Postdoc
Matko Čančer, PhD Student
Anna Borgenvik, PhD Student
Oliver Mainwaring, PhD Student
Anders Sundström, Research Engineer
Gabriela Rosén, Research Engineer / Laboratory Manager

Key publications

  • Suryo Rahmanto A*,1, Savov V*, Brunner AW**, Bolin S**, Weishaupt H**, Maljukova A, Čančer M, Rosén G, Hutter S, Sundström A, Kawauchi D, Jones DT, Spruck C, Taylor MD, Cho YJ, Pfister SM, Kool M, Korshunov A, Swartling FJ# and Sangfelt O#. FBW7 suppression leads to SOX9 stabilization and increased malignancy in medulloblastoma. EMBO J 35:2192–2212 (2016). */ **Authors contributing equally to this work. #Corresponding authors.
  • Hill RM, Kuijper S, Lindsey JC, Petrie K Schwalbe EC, Barker K, Boult J, Williamson D, Ahmad Z, Hallsworth A, Ryan SL, Poon E, Robinson S, Ruddle R, Raynaud F, Howell L, Kwok C, Joshi A, Nicholson SL, Crosier S, Wharton SB, Jacques TS, Robson K, Michalski A, Hargrave D, Pizer B, Bailey S, Swartling FJ, Weiss WA, Chesler L and Clifford SC. MYC and TP53 defects emerge and interact at medulloblastoma relapse, define rapidly progressive disease and can be targeted therapeutically. Cancer Cell 27:72-84 (2015).
  • Swartling FJ#, Savov V, Persson AI, Chen J, Hackett, CS, Grimmer MR, Northcott PA, Lau J, Chesler L, Perry A, Phillips JJ, Taylor MD and Weiss WA. Distinct Neural Stem Cell Populations Give Rise to Disparate Brain Tumors in Response to N-MYC. Cancer Cell 21:601-13. (2012). #Corresponding author
  • Swartling FJ, Grimmer MR, Hackett CS, Northcott PA, Fan QW, Goldenberg DD, Lau J, Masic S, Collins R, Nguyen K, Yakovenko S, Zhe XN, Flynn Gilmer HC, Nagaoka M,  Phillips JJ, Jenkins RB, Tihan T, Vandenberg SR, James CD, Tanaka K, Taylor MD, Weiss WA and Chesler L. Pleiotropic role for MYCN in medulloblastoma. Genes and Development 24:1059-72 (2010).
  • Persson AI, Petrisch C*, Swartling FJ*, Melissa I, Goldenberg DD, Vandenberg SR, Nguyen KN, Yakovenko S, Ayers-Ringler J, Thorne CA, Lee E, Nishiyama A, Stallcup WB, Berger MS, Bergers G, McKnight TR and Weiss WA. Non-stem cell origin for oligodendroglioma. Cancer Cell 18: 669- 682. (2010). *Equal contribution.

External homepage

http://www.igp.uu.se/research/neuro-oncology/fredrik-swartling

Contact

fredrik.swartling@igp.uu.se