Juliette Griffié

DDLS Fellow, Stockholm University

Key Publications

1. Inês Cunha, Mario Del Rosario, Luca Panconi, Rita Carlota, Sebastian Bauer, Maxime Gestin, Emma Latron, Erik Sahai, Ricardo Henriques, Alix LeMarois, Juliette Griffié
AI4CellFate: Interpretable Early Cell Fate Prediction with Generative AI
Accepted in Nature Communications, June 2026

2. Sebastian Bauer, Luca Panconi, Ines Cunha, Emma Latron, Daniel Sage, Ruby Peters, Juliette Griffié
SMLMFlow: Improving Structural Resolution in Single Molecule Localization Microscopy with Flow Matching
bioRxiv June 2026

3. I. Cunha, E. Latron, S. Bauer, D. Sage, J. Griffié. Machine learning in microscopy – insights, opportunities and challenges.
Journal of Cell Science 2024

4. J. Griffié, G. Burn, D.J. Williamson, R. Peters, P. Rubin-Delanchy, D.M. Owen. Bayesian cluster analysis of live‐cell single molecule localization microscopy datasets.
Small methods 2022 – highlighted in Physics world

5. D Mahecic, WL Stepp, C Zhang, J Griffié, M Weigert, S Manley. Event-driven acquisition for content-enriched microscopy.
Nature Methods 2022

Research Interests

My research interest lies at the intersection of life science and data analysis. My laboratory, the computational microscopy for cell biology (CMCB) laboratory, focuses on the development of computational tools, with an emphasis on generative AI and interpretable machine learning, to extract physiologically relevant information from complex datasets, with a particular interest in microscopy and multi modal integration. Based on these findings, we build theoretical/modelling frameworks to facilitate drug development and improve our understanding of diseases

The CMCB lab has fully funded job opportunities available (PhD students & Post docs) over a wide range of projects. Whether you are a cell biologist or a data analysis enthusiast from physics, computer science or engineering background, if you have a deep interest in using imaging to better understand immune cells, get in touch!

Group members

  • Ines Cunha
  • Emma Latron
  • Sebastian Bauer
  • Harshith Bachimanchi
  • Doga Yalova

Last updated: 2026-06-26

Content Responsible: David Gotthold(david.gotthold@scilifelab.se)