Marcel Tarbier

DDLS Fellow, Uppsala University

Key Publications
Malat1 affects transcription and splicing through distinct pathways in mouse embryonic stem cells
NAR Genomics and Bioinformatics, 2024
Gene-expression memory-based prediction of cell lineages from scRNA-seq datasets
Nature Communications, 2024
The limits of human microRNA annotation have been met
RNA, 2022
Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells
Nature Communications, 2020
Circulating miRNA Signature Predicts and Rescues Spaceflight Associated Health Risks
SSRN Electronic Journal, 2020

We develop and apply innovative computational tools to infer and integrate complex cell features (e.g., cellular ancestries and micro-environment) to dissect intra-tumor cancer heterogeneity, especially phenotype switches (e.g., acquisition of therapy resistance and tissue invasion). Our aim is to identify and characterize markers for disease progression, molecular phenotypes that can guide treatment and novel therapeutic targets to improve patient care through precision medicine. While working purely computationally, we apply an interdisciplinary approach bringing together cutting-edge molecular biology, technology and algorithms – together with our collaborators and partners in academia and industry.

Group members

Glenn Ross-Dolan
Ioannis Mystakidis
Sanjiv Kumar Dwivedi
Silu Lin

Last updated: 2025-09-22

Content Responsible: Hampus Pehrsson Ternström(hampus.persson@scilifelab.uu.se)