Data Availability and Access
SciLifeLab DataCentre provides a number of scientific resources of national interest. Among these are the Swedish allele frequency database, SweFreq, and data access services for large scale genomic data from SciLifeLab supported sequencing projects.
Can I get access?
Yes, if the requirements are fulfilled and if the subject of your study where the data will be used is covered by the informed consent given by the individuals sequenced, and if there is an ethical permission that covers the research project.
How do I get access?
In 2017, the SweGen project published its findings, “SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population“. The data from this project is available to the scientific community, and this includes access both to aggregate allele frequency data (through the SweFreq database) and full whole-genome sequencing data from 1000 individuals, subject to access control arrangements. SciLifeLab Data Centre manages the access, together with NBIS, SNIC and the SweGen project group. The aggregate data in SweFreq comes with specific access terms but is generally available to the public. Please see these terms here.
The data set connected to the publication “RNA Sequencing Provides Novel Insights into the Transcriptome of Aldosterone Producing Adenomas“. It contains RNA-Seq data from fifteen aldosterone producing adenomas, Whole Genome Sequencing data from two aldosterone producing adenomas and one normal peripheral blood sample. SciLifeLab Data Centre manages the access, together with NBIS, SNIC and the AldoRNAseq project group.