Sara Henriksson

Head of Unit: Integrated Microscopy Technologies, Umeå University

Key Publications
Cellular Hallmarks From Volume Electron Microscopy Reveal Developmental Progression of Plasmodium Ookinetes
ADVANCED SCIENCE, 2026
Multimodal characterization of flow-induced thrombus initiation and growth in extracorporeal membrane oxygenation
SCIENTIFIC REPORTS, 2026
Genome-wide identification of modulators of <i>Chlamydia trachomatis</i> parasitophorous vacuole stability highlights an important role for sphingolipid supply
PLOS BIOLOGY, 2025
A genome-wide genetic screen identified targets for destabilizing the parasitophorous vacuole of Chlamydia trachomatis
bioRxiv, 2024
Enzymatically dissociated muscle fibers display rapid dedifferentiation and impaired mitochondrial calcium control
ISCIENCE, 2022

The IMT-Umeå unit focuses on volume EM imaging by Focused Ion Beam Scanning Electron Microscopy (FIB-SEM). This technique is site specific and can answer scientific questions about the 3D context of organelles, cells and tissue. Our Scios FIB-SEM is equipped with a sensitive in-lens backscattered electron detector that reveals compositional differences in a sample, similar to a conventional TEM.

The FIB-SEM is also equipped with a gallium ion source that will mill away material on any type of sample inside the microscope. Cycles of repetitive milling and scanning of the same surface results in a 3D image volume of the sample, with equal resolution (5-20 nm) in all (x, y and z) dimensions.  After computational alignment of a stack of images into a 3D-volume, cells and organelles can be segmented and provide a visual 3D model of the selected cell or tissue volume.

We provide service and training for all users with sample preparation, microscopy and image processing.

Group Members:

Nils Hauff
Agnieszka Ziolkowska
Behnam Lak

Last updated: 2025-09-29

Content Responsible: Hampus Pehrsson Ternström(hampus.persson@scilifelab.uu.se)