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SciLifeLab Day Umeå
September 11, 2023 @ 08:30 – 17:00 CEST
SciLifeLab has launched four new sites across Sweden in 2022. The sites, located in Gothenburg, Linköping, Lund, and Umeå, will be crucial in promoting scientific research and research infrastructure nationally, while also strengthening the collaboration between all Swedish universities.
Welcome to the second kick-off event for the national SciLifeLab site – now hosted by Umeå! Learn more about the services and infrastructure development, research highlights, and activities offered by SciLifeLab, both nationally and locally; interact with the SciLifeLab capabilities – Precision Medicine, Pandemic Laboratory Preparedness and Planetary Biology, and much more!
SciLifeLab Umeå cordially invites the research community of Umeå and beyond to join, network, and celebrate together the Umeå site inauguration!
|Session 1: Research infrastructure in Umeå|
Rotundan, Universum, Umeå University (map)
|08:30||Registrations and coffee|
|09:00||Welcome and introduction to Life Science research infrastructure in Umeå|
Katrine Riklund, Pro-Vice-Chancellor Umeå University
|09.10||Umeå research infrastructure presentations|
Hans Stenlund – Metabolomics and bioinformatics
Stina Berglund Fick – Chemical biology
Richard Palmqvist – Genomics and diagnostics
Michael Hall – Molecular structure
Sara Henriksson – Bioimaging and correlative microscopy
|Session 2: SciLifeLab’s capabilities – Research, lunch and networking, |
Three parallel sessions organized by national and local representatives of Precision Medicine, Planetary Biology and Pandemic Laboratory Preparedness.
Lunch sandwich and refreshements are served in connection to each seminar.
Rotundan, Universum, Umeå University (map)
See program below
|11:00-13:00||Pandemic Laboratory Preparedness|
Universitetsklubben, Universum, Umeå University (map)
See program below
Glasburen, Chemical Biology Center, Umeå University (map)
See program below
|Session 3: Research highlights and launch of the SciLifeLab site Umeå|
Aula Nordica & Brashörnan, Universum (map)
|13:00||Registration and Coffee|
|13:30||SciLifeLab as a National Research Infrastructure for Life Science|
Olli Kallioniemi, Director SciLifeLab
Mia Phillipson, Co-director SciLifeLab
Annika Jenmalm Jensen, Infrastructure Director SciLifeLab
|13:50||Presentation of Umeå SciLifeLab group leaders|
Anna Arnqvist, Associate Dean for research, Umeå University
|14:00||Virus-host cell interactions. Implications for tropism, treatment, and targeting|
Niklas Arnberg, Department of Clinical Microbiology, Molecular Infection Medicine Sweden (MIMS), Umeå University
|14:15||Electron microscopy methods to study cytoskeleton structure and assembly|
Linda Sandblad, Department of Chemistry, Molecular Infection Medicine Sweden (MIMS), Umeå University
|14:30||Bacterial cell wall homeostasis and plasticity: from fundamentals to antimicrobial targeting|
Felipe Cava, Department of Molecular Biology, Molecular Infection Medicine Sweden (MIMS), Umeå University
|14:45||Biotechnology in a forestry industry context – current and future applications|
Anna Karlberg, Vice President Forest R&D, Stora Enso
|15:05||Research infrastructure poster session, cake & drinks|
Mingle and cakes for everyone
|15:50||The Data-driven life science (DDLS) research program|
Oliver Billker, Director Molecular Infection Medicine Sweden (MIMS), Department of Molecular Biology, Umeå University
|16:00||Isolating adaptive variation from natural forest trees|
Kelly Swarts, Umeå Plant Science Centre, Swedish University of Agricultural Sciences
|16:15||Performance by Nordcirkus|
|16.25||Introduction of WCMM research program|
Pernilla Wikström, Department of Medical Biosciences, Co-Director Wallenberg Centre for Molecular Medicine (WCMM), Umeå University
|16:35||Targeting tumor-stromal interactions in pancreatic cancer|
Daniel Öhlund, Department of Radiation Sciences, Wallenberg Centre for Molecular Medicine (WCMM), Umeå University
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Pandemic Laboratory Preparedness
In December 2020, the Swedish government commissioned SciLifeLab to build laboratory capacity to mitigate the effects of future pandemics. In this session we will present how we are are optimizing SciLifeLab’s operations to support and complement the work of other government and regulatory entities at a national and local level with a special focus on activities in Umeå. We will also discuss what we need to do in order to be prepared for future pandemics.
Chair: Ulf Ribacke, SciLifelab Co-director for the SciLifeLab Pandemic Preparedness Program, PLP
Welcome & Introduction of SciLifeLab Pandemic Preparedness Program, PLP
Alice Sollazzo, SciLifeLab coordinator for PLP programmet
Development of a targeted metagenomic NGS platform for diagnostics and epidemiological surveillance of viral pandemic threats
Lisa Pettersson, Region Västerbotten
Preparedness by Early Detection of Infections in the Elderly.
Mattias Forsell,Umeå University
DDLS infection biology and Pandemic preparedness
Oliver Billker, Umeå University
Lisa Pettersson, Mattias Forsell, Oliver Billker
Moderator Ulf Ribacke, Karolinska Institutet
Ulf Ribacke, SciLifelab Co-director for the SciLifeLab PLP Program
Planetary Biology Capability at SciLifeLab arises from the urgent need for trans-disciplinary and coordinated approaches to study all the different forms of life – the earth’s biodiversity – from single molecules and cells to individual species, species communities, ecosystems, and their functioning on the planet.
The Planetary Biology Capability aims to make use of SciLifeLab’s national research infrastructure, technology, and scientific excellence to promote and accelerate ecosystem- to planetary-scale life science research, linking molecular-scale understanding to ecosystem function and biodiversity.
In order to achieve this, we plan to:
– Build a strong national Planetary Biology community
– Increase SciLifeLab’s accessibility and tailor services for the PB community
– Promote knowledge exchange between the PB community, stakeholders and SciLifeLab
– Outreach and engage with the community, translating knowledge to foster public debate and opinion
Presentation from local researchers
Tracking illegal trade across the planet
Göran Spong, Swedish University of Agricultural Sciences
Norway Spruce and Scots pine Genome sequencing, Re-sequencing and Genomic Selection
Ove Nilsson, Umeå Plant Science Center/Swedish University of Agricultural Sciences
Recovering the genetic signal of microorganisms from water columns and sedimentary archives: towards unraveling the effects of global change on aquatic microbial communities
Eric Capo, Umeå University
The precision medicine session will introduce the recently published SciLifeLab RoadMap for Precision Medicine and other ongoing activities related to precision medicine at SciLifeLab.
We will also hear examples of ongoing precision medicine research in Umeå, and discuss local and national challenges in the field and how SciLifeLab can contribute to solving these challenges.
Introduction to Precision Medicine Capability
Päivi Östling, Scientific Lead for Precision Medicine, SciLifeLab
DNA methylation as a tool to personalize cancer treatment
Sofie Degerman, Associate Professor, Umeå University
Blocking SOD1 prions as new therapy for ALS
Peter Andersén, Professor and Senior Consultant, Umeå University, Umeå University Hospital
How can SciLifeLab contribute to accelerating research and implementation of precision medicine in Umeå and nationally?
Ulrica Bergström, Strategist för university healthcare, Region Västerbotten
Andreas Josefsson, Associate Professor and Consultant Urologist, Wallenberg Center for molecular medicine, Umeå University, Umeå University Hospital
Katrine Riklund, Professor and Pro-Vice-Chancellor, Umeå University, and Senior Consultant, Umeå University Hospital
Malin Sund, Guest Professor, Umeå University and Professor/Senior Consultant, University of Helsinki and Helsinki University Hospital
Moderator: Åsa Johansson, Scientific Lead for Precision Medicine, SciLifeLab