Events and courses

This intense one-week workshop provides an introduction to the analysis of next generation sequencing data. Lectures on the theory of concepts will be paired with practical computational exercises in the Linux environment. The practical exercises will focus on data from the Illumina platform, but we will discuss other sequencing platforms and the advantages and challenges to using their data during the lectures.

National course open for PhD students, postdocs, researchers and other employees in need of fundamental Python skills within all Swedish universities

The purpose of the course is to prepare and train Cryo-EM facility users in sample preparation methods, introduce users to the image data acquisition workflow, expand knowledge about cryo-EM methods among researchers and show that everyone can learn how to use cryo-EM for structure and cell biology. The course is open for facility users or […]

National course open for PhD students, postdocs, researchers and other employees within all Swedish universities. This course will introduce important aspects of Research Data Management through a series of lectures and hands-on computer exercises. The course is intended for researchers that want to take the first steps towards a more systematic and reproducible approach to analysing and managing research data.

National workshop open for PhD students, postdocs, researchers and other employees within Swedish academia. This course is run by the National Bioinformatics Infrastructure Sweden (NBIS).

TEM sample preparation course – Chemical fixation, high pressure freezing, plastic embedding and staining methods including practice on ultra-microtome sectioning, TEM imaging and an introduction to CLEM (Correlative Light and Electron Microscopy), FIB-SEM (Focused Ion Beam) and electron tomography. Pre-requisite criterion: Basic EM course at UCEM or equal previous experiences of EM methods. Participants will […]

This course is open for PhD students, postdocs, group leaders and core facility staff interested in making their computational analysis more reproducible.

This 4-day workshop aims to highlight the advanced correlative light and electron microscopy (CLEM) techniques. Participants will learn the latest workflows on how to correlate fluorescence microscopy images with high resolution EM images obtained from state-of-the-art equipment. Workshop Content:The workshop includes both theory lectures and practical sessions on In-resin preserved florescence for CLEM, Tokuyasu ultramicrotome […]

This workshop will introduce the best practice bioinformatics methods for processing and analyses of single cell RNA-seq data. The total course duration is 5 days, including the lectures and practical exercises that will be held on site in Stockholm. Application Application open: 2022-11-25 Application deadline: 2022-12-21 Course Leaders Paulo Czarnewski Åsa Björklund Contact: edu.sc@nbis.se Course fee This workshop has a fee of 2000kr […]

This intense one-week workshop provides an introduction to the analysis of next generation sequencing data. Venue options: SciLifeLab Uppsala University, Umeå University and Lund University

This workshop is open for PhD students, postdocs, group leaders and core facility staff from Swedish academic institutions looking for an introduction to multi-omics data analysis and integration of biological data.

Network biology is a new paradigm to understand the complex interactions of the molecules in an organism using an integrative and systems approach. This workshop is intended for scientists interested in learning more about and applying network analysis in their research. We will describe and demonstrate the comprehensive network database FunCoup (https://funcoup.sbc.su.se/) and show how […]