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Spatial omics data analysis

This workshop provides resources to advanced tools for analysis of spatial datasets via a series of online lectures and computer practicals. The total course duration is 40 hours, including the online lectures and practical coding workshop that will be held online.

NBIS – National Bioinformatics Infrastructure Sweden
Online event via Zoom

Snakemake BYOC (bring-your-own-code) workshop (ONLINE)

National workshop open for PhD students (prioritized), postdocs, researchers and others from all Swedish universities who have previously participated in the NBIS Tools for reproducible research course or with demonstrated experience in writing Snakemake workflows.

NBIS – National Bioinformatics Infrastructure Sweden
Online event via Zoom

Workshop on Data Visualization in R – Lund – CANCELLED

This course aims to help researchers to visualize their data in different ways using R, and will also aim to show researchers how they can make publication grade figures using R

NBIS – National Bioinformatics Infrastructure Sweden
Biologihuset Sölvegatan 35, Lund

Exploring the Human Proteome with Antibodies, Transcriptomics and Mass Spectrometry

The summer school is aimed at graduate students, post-docs, and young independent investigators who want to learn about new techniques to explore the proteins encoded by the human genome. The course will teach state-of-the-art analysis of the human proteins with a focus on antibody-based methods, transcriptomics and mass spectrometry. The course will have several daily lectures […]

FEBS Advanced Course
Air&Fire, SciLifeLab Stockholm Tomtebodavägen 23 A, Solna

Introduction to biostatistics and machine learning

National course open for PhD students, postdocs, researchers and other employees in need of biostatistical skills within all Swedish universities. The course is geared towards life scientists wanting to be able to understand and use basic statistical methods. It would also suit those already applying biostatistical methods but have never got a chance to reflect on and truly grasp the basic statistical concepts, such as the commonly misinterpreted p-value.

NBIS – National Bioinformatics Infrastructure Sweden
Navet, SciLifeLab, Uppsala SciLifeLab Uppsala, BMC (Entrance: C11), Husargatan 3,, Uppsala

Introduction to bioinformatics using NGS data

This intense one-week workshop provides an introduction to the analysis of next generation sequencing data. Lectures on the theory of concepts will be paired with practical computational exercises in the Linux environment. The practical exercises will focus on data from the Illumina platform, but we will discuss other sequencing platforms and the advantages and challenges to using their data during the lectures.

NBIS – National Bioinformatics Infrastructure Sweden
Navet, SciLifeLab, Uppsala SciLifeLab Uppsala, BMC (Entrance: C11), Husargatan 3,, Uppsala

Python programming with applications to bioinformatics

National course open for PhD students, postdocs, researchers and other employees in need of fundamental Python skills within all Swedish universities

NBIS – National Bioinformatics Infrastructure Sweden

Cryo-EM sample preparation and data collection course

The purpose of the course is to prepare and train Cryo-EM facility users in sample preparation methods, introduce users to the image data acquisition workflow, expand knowledge about cryo-EM methods among researchers and show that everyone can learn how to use cryo-EM for structure and cell biology. The course is open for facility users or […]

SciLifeLab Umeå

Introduction to Data Management Practices

National course open for PhD students, postdocs, researchers and other employees within all Swedish universities. This course will introduce important aspects of Research Data Management through a series of lectures and hands-on computer exercises. The course is intended for researchers that want to take the first steps towards a more systematic and reproducible approach to analysing and managing research data.

NBIS – National Bioinformatics Infrastructure Sweden
Air&Fire, SciLifeLab Stockholm Tomtebodavägen 23 A, Solna

Epigenomics Data Analysis: from Bulk to Single Cell (ONLINE)

National workshop open for PhD students, postdocs, researchers and other employees within Swedish academia. This course is run by the National Bioinformatics Infrastructure Sweden (NBIS).

NBIS – National Bioinformatics Infrastructure Sweden
Online event via Zoom

TEM sample preparation practical course part II

TEM sample preparation course – Chemical fixation, high pressure freezing, plastic embedding and staining methods including practice on ultra-microtome sectioning, TEM imaging and an introduction to CLEM (Correlative Light and Electron Microscopy), FIB-SEM (Focused Ion Beam) and electron tomography. Pre-requisite criterion: Basic EM course at UCEM or equal previous experiences of EM methods. Participants will […]

SciLifeLab Umeå
Kemiskt Biologiskt Centrum Umeå University, Linnaeus väg 6, Umeå

NBIS/ELIXIR-SE Tools for Reproducible Research – ONLINE

This course is open for PhD students, postdocs, group leaders and core facility staff interested in making their computational analysis more reproducible.

NBIS – National Bioinformatics Infrastructure Sweden
Online event via Zoom